KEGG   Francisella tularensis subsp. holarctica 425: CH68_658
Entry
CH68_658          CDS       T03715                                 
Symbol
rho
Name
(GenBank) Transcription termination factor
  KO
K03628  transcription termination factor Rho
Organism
ftz  Francisella tularensis subsp. holarctica 425
Pathway
ftz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ftz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CH68_658 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ftz03021]
    CH68_658 (rho)
   03019 Messenger RNA biogenesis [BR:ftz03019]
    CH68_658 (rho)
Transcription machinery [BR:ftz03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     CH68_658 (rho)
Messenger RNA biogenesis [BR:ftz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CH68_658 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 NACHT AAA ResIII AAA_22 DUF3086
Other DBs
NCBI-ProteinID: AJI67070
UniProt: A0A0B3WKA9
Position
complement(592381..593643)
AA seq 420 aa
MNLNELKYKSVNELMDIAQSLDLESLRARKQELIFSILKYHADKGEDIYGEGILEVLQDG
YGFLRSSDSSYFASPDDIYVSPAFIRKLNLRTGDSIVGKIRPPRENEKYFAVKHIDSVNF
DSPELARKKILFENLTPEYAKERLTMEIGNGSNEDITARVIDLAAPFGKGQRGLIVAPPK
TGKTIMMQNIATSIAKNHPECNLIMLLIDERPEEVTEMQRSVRGEVVASTFDEPAARHVQ
LAEIVIEKAKRLVEHKQDVVILLDSITRLARAYNTVSPASGRVLSGGVEANALQKPKRFF
GAARNTAEGGSLTIIATALVETGSKMDEVIFEEFKGTGNMELHLDRKIAERRVFPAISFD
RSGTRREELLTTPEELQKLWVLRKILGGMEDVQAMEFLTEKMKGSLTNEEFFETMKRGAI
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgaacttaaatgaattaaagtataaatctgttaatgagctaatggatatagctcaaagt
ctagatcttgagtcacttcgtgccagaaaacaagagctaatcttctcaattctaaagtac
cacgctgataaaggtgaagacatttatggtgaaggtattttagaagtcctacaagatggc
tatggctttctaagatcttctgatagctcgtacttcgcctctccagatgatatctatgtt
tcacctgcttttattagaaaactaaatctgcgtactggtgatagtattgtcggtaagatt
cgtccgcctcgtgaaaatgagaaatactttgctgtcaaacacatcgatagtgttaacttt
gattctccagaattagctagaaagaaaattttatttgagaacctaactcctgagtatgct
aaagaaaggctaactatggaaattggaaacggctcaaatgaggatattactgctagagtt
atagatttagcggcaccatttggtaaaggtcagcgtggcttgattgttgcaccacctaaa
actggtaagacaatcatgatgcaaaatatcgcaacgtctattgccaaaaatcatccagag
tgtaatctaatcatgctactaattgatgagcgtcctgaggaagttaccgaaatgcaacgc
tccgtgcgaggtgaggtagttgcatctacgtttgatgaaccagctgcacgccatgtccaa
ttagctgaaattgtaatcgaaaaagccaaaagattagttgagcacaaacaagatgtagta
atcttacttgactcaatcacaagactagctcgtgcatacaataccgtatctccagcgtct
ggtcgtgtactatctggtggtgtagaggcaaacgccttacaaaaaccaaaaagattcttt
ggtgctgcgcgtaatactgccgaaggtggtagcttgacaatcattgcaactgctcttgtc
gaaactggttcaaaaatggatgaagttatctttgaagaattcaaaggcacaggtaacatg
gagcttcatcttgatcgtaagattgctgagcgccgcgtcttccctgctattagctttgat
agatctggtacacgtagagaagaactacttactactccagaagagctacaaaaactttgg
gtgctgcgtaagattcttggtggtatggaagatgtccaagctatggaattcttaacagag
aaaatgaaaggctcactaactaatgaagaattctttgaaactatgaaaagaggcgctatt
tag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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