KEGG   Fragaria vesca (woodland strawberry): 101292154
Entry
101292154         CDS       T02666                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03018  RNA degradation
fve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101292154
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101292154
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fve03019]
    101292154
   03041 Spliceosome [BR:fve03041]
    101292154
Messenger RNA biogenesis [BR:fve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     101292154
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     101292154
Spliceosome [BR:fve03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    101292154
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 101292154
NCBI-ProteinID: XP_004306521
Position
LG7:1488232..1491773
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFIRDSDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFSQPDGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcagggaggaaagaaacagtgttggacttggccaagtttgtggacaaaggtgttcaa
gtcaagctcactggtggtagacaagtgacagggactctgaaaggatatgatcagttgtta
aaccttgttctagatgaagcagttgagttcataagagattctgatgatccactgaagact
actgatcaaaccaggcgcctcggcctaattgtttgtaggggaactgctgtgatgcttgtg
tcgccaacagatggtacagatgagattgctaacccctttagccagccagatggtgcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system