KEGG   Fragaria vesca (woodland strawberry): 101307468
Entry
101307468         CDS       T02666                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 35-like
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:fve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fve03041]
    101307468
Enzymes [BR:fve01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     101307468
Spliceosome [BR:fve03041]
 Complex C
  Other components
   Complex C specific factors
    101307468
SSDB
Motif
Pfam: DEAD Helicase_C ResIII SecA_DEAD DUF4614
Other DBs
NCBI-GeneID: 101307468
NCBI-ProteinID: XP_004294217
Position
LG3:complement(11531648..11533658)
AA seq 593 aa
MEEESDLYVPVAKRRAIAAQRLLEKQRAIAKQKILKRKRRSSSEQVDSKVEESKENRTNL
PSLLVTASQLKRDAPEITPKEQLLQQEKQMIEQLPDRKSLMSVHELAKGITYTDPLPTGW
KPPLKIRMRTAKQCDVIRKQWHIKVDGEHIPPPIRSFKDMRFPERILKVLKAKGIVKPTP
IQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMVMMALQEEILMPIAPGEGPFGLVICPS
KELARQTFELVQEFVNAMEEDGRPKIRPLLCIGGVDKKSQQDIVRKGVHIVVATPGRLKD
MLKSKIMKLDNCRYLTLDEADRLLDLGFEDDIREVFDHFKAQRQTLLFSATMPIKIQNFA
TKALVKPVTVNVGRAGAANLDVIQEVDYVKQEAKAFYLLQCLQKTAPPVLIFCEKKADVD
EIHEYLLLKGVQAVAVHGGKDHEEREDAISSFKSGKKDVLVATDVASKGLDFPDIQHVIN
YDMPAEIENYVHRIGRTGRCGKVGIATTFINKNQSETTLLDLKHLLQEAKQRIPPMLAEL
DDPMEHTSDEVEGCAYCGGPGHRVGDCSKLEQHKRIVSSRRDLYGSGGYVGEI
NT seq 1782 nt   +upstreamnt  +downstreamnt
atggaagaagaaagcgacttgtatgtacctgtggcaaagcggagagcgattgcagcgcag
aggcttcttgagaagcagagagcgattgcaaagcagaagattcttaagaggaagagaaga
agcagctctgagcaggttgactctaaagtggaggaatccaaagaaaataggacgaatcta
cctagcctccttgtaacagcgtcacagttgaagcgtgatgctccggagattactccaaaa
gagcagctgctgcaacaagaaaagcagatgattgagcagctccccgatcgcaaatcacta
atgtcagttcatgaattggcaaagggaataacttacacagaccctttgccaacaggttgg
aagcccccattaaagattagaatgagaactgcaaagcaatgtgacgtgatccgcaagcaa
tggcacatcaaagttgatggggaacacattcctcctccaattaggagtttcaaggacatg
agatttccggagcggattttgaaggttttgaaagccaaagggattgtgaaaccgaccccc
attcaggttcaaggtcttcctgtggttttgtccgggagggatatgattggaatagcattt
acaggttccggcaagacattggttttcgtgttgccaatggttatgatggcattgcaggag
gagattctgatgccaattgctccaggagaaggacctttcgggttggttatatgcccatcg
aaagagctagcaaggcagactttcgaattggtacaagagtttgtgaatgctatggaagag
gacggaagaccaaagataaggcctttgctgtgcattggtggagtggataagaagtcacag
caggacattgtgaggaaaggtgttcatatagttgtcgcaactccgggaaggttaaaggat
atgctgaaaagcaaaataatgaagcttgataactgcagatatctaactttagatgaggct
gatagattgttagacttaggctttgaggatgacataagagaagttttcgaccattttaaa
gctcaacgtcaaacgcttctattttcagccaccatgcctattaaaattcagaactttgct
acaaaggctttggttaagcctgtgactgtcaacgtgggaagagctggagcagcaaatctt
gatgtgattcaagaggttgattatgtgaagcaagaggccaaggctttttaccttcttcaa
tgtctgcaaaagactgcgcctcctgttctaatattctgcgaaaagaaagccgatgtggat
gagattcatgaatatcttctgttgaagggagtgcaggcagtggctgttcatggagggaag
gatcatgaagagagagaggatgccatttcttccttcaagtcagggaaaaaagatgtctta
gtggcaactgatgttgcttcaaaaggtttggattttcctgatattcaacatgtcattaat
tatgacatgcctgcagaaatcgaaaactatgttcaccggattggaagaacaggaagatgt
ggcaaggttggaattgcaacaacgtttataaacaagaaccaaagtgagacgacactccta
gatttgaagcacctattgcaagaggccaagcagcgaattccacccatgttggctgagctg
gatgatccaatggaacatacaagtgatgaggttgaaggctgtgcttattgtggcgggcct
ggtcatcgagtcggtgattgttcaaaactagagcagcataaaagaattgtcagctctagg
agggatttatatggttctggtggttacgtaggggaaatatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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