KEGG   Fragaria vesca (woodland strawberry): 101307784
Entry
101307784         CDS       T02666                                 
Name
(RefSeq) DNA polymerase lambda-like
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03410  Base excision repair
fve03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101307784
   03450 Non-homologous end-joining
    101307784
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fve03400]
    101307784
Enzymes [BR:fve01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     101307784
DNA repair and recombination proteins [BR:fve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     101307784
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     101307784
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f DNA_pol_B_thumb HHH_8 BRCT Cdd1 NTP_transf_2 HHH_5 IMS_HHH PTCB-BRCT BRCT_2
Other DBs
NCBI-GeneID: 101307784
NCBI-ProteinID: XP_004298590
Position
LG4:complement(21980419..21984371)
AA seq 531 aa
MYINKLITHLRTVNVKNKTIKSFYLGFTSTQRPRNTSQKLMAPRNQNPPRDPNGMFAGMV
FFLVHNGVMYRRLQIWKNKLVQMGATIELRVTKNVTHILAMNPEALLQEVGSERLGLFKG
RVVQYQWLEDSLIKGEKVPEELYLVKLEAEKSSTENETPNPKKTKLSPESSPHTPSAKTP
KALNEDQVTPLQLSSPYSPPDLNSNITQIFGKLVNIYRALGDDRRSFSYYKAIPVIERLP
FKIQNQEQVKGLPNIGKSMQDHIQEIVTKGKLSKLEHFETDEKVRTISLFGEVWGIGPAT
AQKLYEKGHRTLDDLKNEESLSSSQKLGLKYFDDINQRIPRNEAQEMEHLLQKAGEDVLP
GVDIVCGGSYRRGKASCGDLDIIITHPDGNSHKGFLPKYVKHLKDMKFLREDLVFSLHSE
EGTESGVDTYFGLCTYPGRELRHRIDIKVYPREIYVFALIHWTGNDVLNRRLRVLAESKG
FLLDDDGLFPATRGSLGQRGMRGSESLKFDTEKEVFEFLGFPWLEPQDRNL
NT seq 1596 nt   +upstreamnt  +downstreamnt
atgtatatcaataaattaattacacacctccgcactgtgaatgtgaaaaataaaaccata
aaaagtttctatcttggatttacaagcacccaaagacccagaaacacaagccaaaaatta
atggcgccaagaaaccaaaatccaccgcgcgatccaaacggaatgttcgccggcatggtc
ttcttcttagttcacaatggagtcatgtaccgtcgattacagatatggaagaacaaactg
gtccaaatgggagccactatagaattgcgagtaaccaaaaacgtcacccacatattggct
atgaacccagaagctctcttacaagaagttggcagtgagcgattgggtttgtttaaaggg
agagttgtacagtatcagtggttagaggatagcttgattaaaggtgaaaaggtacctgaa
gaattgtaccttgtgaaattggaagcagaaaagtcttccactgaaaatgaaaccccaaat
cccaaaaagactaaactctctcctgagagctcacctcacactccaagtgctaaaaccccc
aaagctctaaatgaagaccaggtcacaccattgcagttatcctcaccctacagcccacct
gatttgaacagtaacataactcagatatttggaaagcttgtcaatatttatagagctttg
ggcgatgaccggagatcttttagctattacaaggccataccggttatagagaggttgccg
ttcaagatacaaaatcaggaacaagttaaaggcttacctaacattggaaagtcaatgcaa
gaccatattcaggaaatagtgactaaagggaagctatccaagttggagcacttcgaaact
gatgaaaaggtacgaactatcagcttatttggggaagtttggggaattggcccagctact
gcacaaaaattgtatgagaaaggacaccgcacattagatgatctgaagaatgaagaatca
ttatcaagttcacagaagttaggtttaaaatattttgatgatatcaaccagagaattcca
cgcaatgaggctcaggagatggaacatctattacagaaagctggagaagatgttttgcct
ggggtggacattgtatgtggaggatcatatagacgtgggaaagcttcttgtggggatctg
gacattataattacacatcctgatggaaacagtcataaaggctttttacccaagtatgta
aagcatttaaaggatatgaagtttctaagggaggatctggttttcagtttacacagtgag
gagggtactgaatctggtgtcgacacatattttgggctttgcacatatcctggacgagag
ctacgccaccgcatagatatcaaggtctacccacgggaaatatatgtatttgcactaata
cattggacaggcaatgatgtattgaataggaggttgagagttctagctgaatctaaagga
ttcctacttgatgatgatggtctatttccagcaacacggggttctctcggtcaacgggga
atgagaggcagcgaaagcttgaaatttgacacagaaaaggaggtgtttgagtttctcggc
tttccttggcttgaaccacaagatagaaatctgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (31)   

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