KEGG   Fragaria vesca (woodland strawberry): 101309185
Entry
101309185         CDS       T02666                                 
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101309185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fve03019]
    101309185
Messenger RNA biogenesis [BR:fve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     101309185
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     101309185
SSDB
Motif
Pfam: CAF1 RNase_T
Other DBs
NCBI-GeneID: 101309185
NCBI-ProteinID: XP_004287117
Position
LG1:complement(755879..757165)
AA seq 274 aa
MSFVMKSDDVLIREVWNDNVDAEFELIRNIVDEYPYIAMDTEFPGIVSRALGTFKNSFDY
NYQTLKLNVDLLKLIQLGLTFSDENGNLPTCGTDKYCVWQFNFCNFNLNEDMYAPESIEL
LTHSGMDFKKNNEKGIDARRFSELLMTSGIVLNENVVWVTFHSGYDFGYLLKLLTCKDLP
DSQTKFFELINLYFPKIYDVKHLMRFCNSLHGGLNKLAELLDVERVGISHQAGSDSLLTS
FTFMKLKNNFFSGSPKKYAGVLYGLGIEYGHGSH
NT seq 825 nt   +upstreamnt  +downstreamnt
atgtcttttgtgatgaagagtgatgatgttcttattagggaagtttggaatgataatgtt
gatgcggaatttgagttgattcggaatatcgtggatgaatacccttatatagctatggat
acagagtttccaggtatcgtttcgcgcgctctgggcactttcaagaacagctttgattat
aactatcagaccctgaagctcaatgtggacctgttgaagttgattcagctgggtctcacg
ttttcagacgagaatgggaacctgcccacctgtggaactgacaagtactgtgtgtggcag
ttcaatttctgtaactttaatctcaatgaggatatgtatgctccggaatcgattgagtta
ttgacccacagtggaatggatttcaagaagaacaatgagaagggtatcgatgctcgtagg
ttcagtgagctgttgatgacctctggtattgtgctgaatgaaaatgtggtttgggtgacc
ttccatagtggatatgatttcggttacttgctcaagctgcttacctgcaaagaccttcca
gactcgcagacaaagttctttgaattgatcaatttgtacttcccgaaaatttatgatgtc
aagcatctgatgaggttctgcaacagcctccatggtgggttgaacaagctggcggagctg
ttggatgtggagagagttggcatttctcaccaagctggttctgatagtttactcaccagt
tttaccttcatgaaactgaaaaacaatttctttagtgggtctcctaagaaatatgctggt
gtcttatatggtcttggtattgagtatggacatggatctcattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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