KEGG   Gemmatirosa kalamazoonensis: J421_3299
Entry
J421_3299         CDS       T03025                                 
Name
(GenBank) succinate dehydrogenase or fumarate reductase, flavoprotein subunit
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
gba  Gemmatirosa kalamazoonensis
Pathway
gba00020  Citrate cycle (TCA cycle)
gba00190  Oxidative phosphorylation
gba00650  Butanoate metabolism
gba01100  Metabolic pathways
gba01110  Biosynthesis of secondary metabolites
gba01120  Microbial metabolism in diverse environments
gba01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:gba00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    J421_3299
   00650 Butanoate metabolism
    J421_3299
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    J421_3299
Enzymes [BR:gba01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     J421_3299
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C DAO Pyr_redox_2 NAD_binding_8 Pyr_redox GIDA YjeF_N AlaDh_PNT_C HI0933_like FAD_binding_3
Other DBs
NCBI-ProteinID: AHG90836
UniProt: W0RJ93
Position
complement(3821722..3823638)
AA seq 638 aa
MELNARIPDGPIEQKWDKARFDMKLVNPANKRKYHVIVVGSGLAGGAAAASLSELGYNVT
CFCYQDSPRRAHSIAAQGGINAAKNYHNDGDSVFRLFYDTIKGGDFRAREANVYRLSQNS
LNIIDQAVAQGVPFAREYSGLLDNRSFGGAQVSRTFYARGQTGQQLLLGCYQALEKEVAK
GGVTMIPRTDMIDLIVVNGRARGIVVRDQMTGEVRAHVADAVILCTGGYGNVFYLSTNAK
GCNTTAIWRAYKKGAAFGNPCYTQIHPTCIPVHGEYQSKLTLMSESLRNDGRVWVPKRRE
DCGKRPEDIAEQDRDYYLERKYPSFGNLSPRDIASRAAKQVCDEGRGVGEGGRGVYLDFR
DAIQRLGRKKIEERYGNLFEMYERITAEDPYKVPMRIYPAVHYTMGGLWVDYNLMSTVPG
LFVGGEANFSDHGANRLGASALMQGLSDGYFILPNTIGNYFGSTKVEPLAADSPEVRAAV
AAGAARVEKLLSVNGKRSVASFHRELGAIMWEKCGMARNRQGLTEALQEIPALREEFWRN
VTVPGGNTTLNQTLEHALRVADFMELAELMCRDALHREESCGGHFREEYQTEDGEALRDD
DNFAYVAAWEYTGDDSEPRLHKEPLQFEYVHLQQRSYK
NT seq 1917 nt   +upstreamnt  +downstreamnt
atggaactgaacgcacggatccccgacggaccgatcgagcagaagtgggacaaggcccgc
ttcgacatgaagctcgtgaacccggccaacaagcggaaatatcacgtcatcgtcgtcggc
agcgggctcgccggcggggcggcggcggcgtcgctgagtgagctgggctacaacgtcacc
tgcttctgctaccaggactcgccgcgccgcgcgcactccatcgccgcgcagggcggcatc
aacgcggcgaagaactaccacaacgacggcgactccgtcttccgcctgttctacgacacg
atcaagggcggcgacttccgcgcgcgcgaggcgaacgtgtaccgcctgtcgcagaactcg
ctgaacatcatcgaccaggcggtcgcgcagggtgtgccgttcgcccgcgagtacagcggg
ctgctcgacaaccgctcgttcggcggcgcgcaggtctctcggacgttctacgcgcgcggg
cagactggccagcagctcctgctcggctgctaccaggcgctcgagaaggaggtggcgaag
ggcggcgtgacgatgatcccgcgcaccgacatgatcgacctcatcgtggtcaacgggcgc
gcccgcggcatcgtcgtgcgcgaccagatgaccggcgaggtgcgggcgcacgtcgccgac
gcggtgatcctgtgcacgggcggctacggcaacgtgttctacctctccacgaacgcgaag
gggtgcaacacgacggcgatctggcgcgcgtacaagaagggcgccgcgttcggcaacccg
tgctacacgcagatccacccgacgtgcatcccggtgcacggcgagtatcagtcgaagctc
acgctgatgtcggagtcgctccgcaacgacggccgcgtgtgggtgccgaagcgccgcgag
gactgcggcaagcgccccgaggacatcgcggagcaggatcgcgactactacctcgagcgg
aagtatccgagcttcggcaacctgtcgccgcgcgacatcgcgagccgcgccgcgaagcag
gtgtgcgacgagggacgcggcgtcggcgagggcggccgcggcgtgtacctcgacttccgc
gacgccatccagcgactcggccggaagaagatcgaggagcgctacggcaacctgttcgag
atgtacgagcggatcaccgccgaggatccgtacaaggtgccgatgcgcatctaccccgcc
gtgcactacacgatgggcggcctgtgggtcgactacaacctgatgagcaccgtgcccggc
ctgttcgtcggcggcgaggcgaacttctccgaccacggggcgaatcggttaggcgcgtcg
gcgctcatgcaggggctcagcgacggctacttcatcctgccgaacacgatcggcaactac
ttcggctcgacgaaggtcgagccgctggccgccgactcgcccgaggtccgcgcggcggtg
gcggcgggtgcggcgcgcgtggagaagctgctctcggtgaacggcaagcgctcggtggcg
agcttccaccgcgagctcggcgcgatcatgtgggagaagtgcggcatggcgcgcaaccgg
caggggctcaccgaggcgctgcaggagatcccggcgctgcgggaggagttctggcgcaac
gtcacggtgccgggcgggaacacgacgctgaaccagacgctggagcacgcgctccgcgtg
gcggacttcatggagctcgcggagctgatgtgccgcgacgcgctgcaccgcgaggagtcg
tgcggcggccacttccgcgaggagtaccagaccgaggacggcgaggcgctgcgcgacgac
gacaacttcgcctacgtcgcggcctgggagtacacgggcgacgattcggagccgcgactg
cacaaggagccgctgcagttcgagtacgtgcacctgcagcagcggagctacaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (7)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (50)   

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