KEGG   Granulibacter bethesdensis CGDNIH1: GbCGDNIH1_0129
Entry
GbCGDNIH1_0129    CDS       T00392                                 
Name
(GenBank) Diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
gbe  Granulibacter bethesdensis CGDNIH1
Pathway
gbe00300  Lysine biosynthesis
gbe00470  D-Amino acid metabolism
gbe01100  Metabolic pathways
gbe01110  Biosynthesis of secondary metabolites
gbe01120  Microbial metabolism in diverse environments
gbe01230  Biosynthesis of amino acids
Module
gbe_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:gbe00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GbCGDNIH1_0129
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    GbCGDNIH1_0129
Enzymes [BR:gbe01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     GbCGDNIH1_0129
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N Ligase_CoA_2
Other DBs
NCBI-ProteinID: ABI61027
UniProt: Q0BVX5
Position
145000..146346
AA seq 448 aa
MMDMHVTDTDRPDPSVMELIAARPSLSMHAMDGLLLDDVPLNAIADAQGTPCWVYSAGTF
RRRYRLLRDALAEAGIAPHIHFAVKANDHLAVLRLLGNEGAGADVVSGGELSRARAAGIP
GERIVFSGVGKTAAELTLALSEGIAQINVESAEELEMLSAIACGMGRTARIALRVNPDVD
AGTHPKITTGLADNKFGIQAGDVPALYARAASLPGIEPVGLAMHIGSQINVMTPFLAAFR
RMAILVQALRDQGLTVRLVDCGGGLGIDYRGDVTSTPAALAGAMKAELGGLDVQLVLEPG
RWLAGPAGVLLSSVVLVKQSRPRPFVVLDAAMNDLLRPSLYEAWHGIVPLSAVEAAHMPI
DCDVVGPVCETGDTFARSRSLPPLQGGSRVAILEAGAYGAVMSSTYNARPLAAQVLVDDG
HWAVIRPRQTVDALWRDEVIPPHLTRQG
NT seq 1347 nt   +upstreamnt  +downstreamnt
gtgatggacatgcatgtgacggatacggaccgaccggacccttcggtgatggaactcatt
gccgcacgcccgagcctttccatgcatgcgatggatggattgctgctggatgatgtgccg
ctgaatgccattgccgatgctcagggcacgccgtgctgggtctactcggcggggacgttc
cgccggcgttaccggctgttgcgtgatgcgctggcggaggcagggatcgcgccgcatatc
catttcgccgtgaaggccaatgaccatcttgccgtgctgcgtctgctcggcaatgagggg
gcgggcgcggatgtggtcagtggcggcgaactcagccgtgcgcgggccgctggcattccg
ggggagcggatcgtgttctccggtgttggcaagaccgcggcagagctgacactggctctg
tccgaagggatcgcccagatcaatgtggagagcgcggaggagctggagatgctctccgcc
attgcctgcggtatgggccgcacggcgcggatcgcgctgcgggtcaatccggatgtggat
gccggtacgcaccccaagattacgacaggtctggccgataacaaattcggcattcaggcc
ggggatgtgcctgccctgtatgcgcgggctgcgtccctgcctgggatcgaaccggtcggc
ctcgctatgcatatcggcagccagatcaatgtcatgacccccttcctggccgcattccgc
cgtatggcgattctggtgcaggcgctgcgggatcagggattgacagtcaggctggtggat
tgtgggggtggtctggggatcgattatcgcggcgatgtcacctccaccccggcggcgctg
gctggggcgatgaaggcagagctgggcggtctggacgtgcagctggtgctggagccgggg
cgctggctggccggtcctgccggtgtgctgctgtccagcgtcgtcctggtgaagcagtcc
cgtccgcgtcctttcgtggtgctggatgcggcgatgaacgatctgctgcggccctccctg
tatgaggcatggcacggaatcgtgcccttatccgcggttgaggccgcgcatatgccgatc
gactgcgatgtggtgggtccggtctgtgaaaccggtgatacctttgcgcggtcgcggtcg
ctgccgccgcttcagggcggcagccgggtcgcaattctggaggcgggggcttacggtgcg
gtgatgagctccacatataatgccagaccactggcggctcaggtgctggttgatgatggg
cactgggcggtgatccgcccgcgtcagacggtcgatgcgttgtggcgtgatgaggtgatt
ccaccgcatctcacccggcagggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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