KEGG   Immundisolibacter cernigliae: PG2T_13250
Entry
PG2T_13250        CDS       T04454                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
gbi  Immundisolibacter cernigliae
Pathway
gbi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PG2T_13250 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gbi03021]
    PG2T_13250 (rho)
   03019 Messenger RNA biogenesis [BR:gbi03019]
    PG2T_13250 (rho)
Transcription machinery [BR:gbi03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     PG2T_13250 (rho)
Messenger RNA biogenesis [BR:gbi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     PG2T_13250 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 AAA_22 AAA OB_RNB NACHT DUF3086
Other DBs
NCBI-ProteinID: ANX05045
UniProt: A0A1B1YW58
Position
2790590..2791846
AA seq 418 aa
MNLTALKLTPVAELVAMAQESRLEGASRQRKEEIIFALLKAHARKGEDIFGEGVMEMLPD
GYGFLRSNTNSYLASLDDIYVSPSQIRRFGLRTGDTISGKIRPPKDGERYFALLKIDELN
FEPLEAARNKILFENLTPLFADERFTLERGNGTTEDITPRIIDMVAPIGKGQRGLIVSPP
KAGKTMMLQSVAHSLTANHPEIYLMVLLIDERPEEVTEMRRTVRGEVIASTFDEAATRHV
QVADMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALDKPKKF
FGAARNIEEGGSLTIIATTLVETGSRMDDVIYEEFKGTGNMEIHLERKIAERRIFPAINI
NRSGTRREELLMKPDEVQKVWILRRLLASMDEVAAMEFLLERLKNTKSNGEFFASMKA
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgaatctgaccgcgctgaaactcacgccggtggccgaactggtggccatggcccaggaa
tcgcgtctggagggtgcctcccgccagcgcaaggaagaaatcatctttgccctgctcaag
gcccacgcccgcaagggcgaggacatcttcggcgaaggcgtgatggaaatgctgccggac
ggctacggcttcctgcgctcgaacaccaattcctacctggcgagcctggacgacatctac
gtctcgcccagtcaaatccgccgcttcggcctgcgcaccggcgacaccatctccggcaag
attcgcccgcccaaggacggcgagcgctacttcgcgctgctcaagatcgacgagctgaac
ttcgagccgctggaagcggcccgcaacaagattctgttcgagaacctgacgcccctgttc
gccgacgagcgcttcacgctcgagcgcggcaacggcaccaccgaggacatcaccccgcgc
atcatcgacatggtggcgccgatcggcaaaggccagcgcggcttgatcgtgtcgccgccc
aaggccggcaagaccatgatgttgcagtcggtcgcccactcgctgaccgccaaccacccc
gagatctacctcatggtgctgctcatcgacgagcggccggaggaagtgaccgaaatgcgc
cgcacggtgcgcggcgaggtcatcgccagcaccttcgacgaggccgccacgcgccacgta
caggtggccgacatggtgatcgagaaggccaagcgtctggtcgagcacaagcgcgacgtg
gtgatcctgctcgattccatcacgcgcctggcgcgcgcctacaacaccgtcatcccgtcc
tcgggcaaggtgctgaccggcggtgtcgatgcccacgccctggacaagccgaagaaattc
tttggcgccgcccgcaacatcgaggaaggcggcagcctgaccatcatcgccaccacgctg
gtcgagaccggctcgcgcatggatgacgtgatctacgaggagttcaagggcaccggcaac
atggaaatccacctcgaacgcaagattgccgagcggcgcatcttcccggccatcaacatc
aaccgctccggcacccgccgcgaggagctgctgatgaagccggacgaagtgcaaaaggtg
tggatcctgcgccgcctgctggcctccatggacgaggtcgcagccatggaattcctgctc
gaacgcctcaagaacaccaagagcaacggcgagttcttcgcctccatgaaggcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (22)   

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