KEGG   Gallionella capsiferriformans: Galf_2116
Entry
Galf_2116         CDS       T01295                                 
Name
(GenBank) RNA-binding S4 domain protein
  KO
K06182  23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Organism
gca  Gallionella capsiferriformans
Brite
KEGG Orthology (KO) [BR:gca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gca03009]
    Galf_2116
Enzymes [BR:gca01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     Galf_2116
Ribosome biogenesis [BR:gca03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Galf_2116
SSDB
Motif
Pfam: S4 PseudoU_synth_2
Other DBs
NCBI-ProteinID: ADL56121
UniProt: D9SI31
Position
2292097..2292795
AA seq 232 aa
MTEPVRLAKRLVELVACSRREAELYIAGGWVMVDGQIVEEPQFMVSEQLVELHPNADLTP
IEPATLLFHHLNATNTTAICAGTRSADDLSGIHLLRQHFFKLTPCTPLERNASGLTVLTQ
DFRIIRKLKDEAATIEQEYIVEIAGEIMADGLKLLNHGLKFNGKPLPPAKVSWQNETRLR
FALKGVIPGQIAAMCQKVGLDVISMRRIRIGRISMAKLQPDQWRYLMLHERF
NT seq 699 nt   +upstreamnt  +downstreamnt
atgaccgaacccgtccgtctcgccaaacgcctcgtcgaattagtcgcatgctctcgccgt
gaagccgaactctatattgccgggggttgggtcatggtcgacggacagatcgtagaagag
ccgcagttcatggtatcggaacagctggtcgaattacatccgaatgcggacctcactccg
attgagcctgccaccctgctgttccatcatctgaatgccaccaataccaccgcaatatgc
gccggtacgcgctcggctgacgacctgtccggcatccacctactgcgccagcattttttc
aaattgacaccctgcacaccgctggaacgtaacgcaagcggcctgaccgtactcacgcag
gactttcgcatcatccgtaagctcaaagatgaggccgccaccatcgaacaagaatacatc
gttgaaatcgctggcgagattatggccgatggactgaagctgctcaatcacggcctgaaa
ttcaacggcaagcccctgcccccggctaaggtcagctggcaaaacgaaacccgcttacgt
ttcgcgctcaagggtgtcatacccggccagattgctgcgatgtgccaaaaggtcggcctg
gacgtcatttctatgagacgcatccgcatcggacgaatctcgatggcaaaattacaaccg
gaccaatggcgttacctgatgctccacgaacggttttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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