KEGG   Geminocystis sp. NIES-3709: GM3709_1160
Entry
GM3709_1160       CDS       T04142                                 
Name
(GenBank) carotenoid cis-trans isomerase
  KO
K09835  prolycopene isomerase [EC:5.2.1.13]
Organism
gen  Geminocystis sp. NIES-3709
Pathway
gen00906  Carotenoid biosynthesis
gen01100  Metabolic pathways
gen01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:gen00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00906 Carotenoid biosynthesis
    GM3709_1160
Enzymes [BR:gen01000]
 5. Isomerases
  5.2  cis-trans-Isomerases
   5.2.1  cis-trans Isomerases (only sub-subclass identified to date)
    5.2.1.13  prolycopene isomerase
     GM3709_1160
SSDB
Motif
Pfam: Amino_oxidase NAD_binding_8 DAO FAD_binding_2 GIDA FAD_oxidored Pyr_redox_2 HI0933_like FAD_binding_3 Thi4 ImmE5 Lycopene_cycl UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: BAQ64395
UniProt: A0A0D6AP03
Position
1315836..1317329
AA seq 497 aa
MSHYDVIVIGSGIGGLVTATQLASKGINVLVLESYTIPGGSAGYFEREGYRFDVGASMIF
GFGENGTTNLLTRALDAVNQKMETIADPVQIHYHLPNNLDLKVHRDYDKFLQELYDRFPE
EEKGIKSFYDECWYVFNCLNSMELLSLEEIRYLTRVFFQHPLSCLGLVKYLPLNVGDVAR
KYIKNPELLKFIDMECYCWSVVPADLTPMINAGMVFSDRHYGGINYPKGGVGKIGETLAQ
GLEKLGGEIQYQARVTEIILEGNQAKGVRLANGKEYFAKRIVSNATRWDTFDKLIDKSKK
PKKEVKWQKNYRQSPSFLSLHLGVEAKVLAHHPECHHIILENWRNLEAEQGTIFVSIPTL
LDPSLAPEGYHIIHAFTPSSIEYWEELSPTQYESKKEEVAGRLIERLEVIFPGLDAGLDY
MEIGTPRTHRKFLGRINGTYGPIPAKRLNGLLSMPFNRTAIKNLYCVGDSTFPGQGLNAV
AFSGFSCAHRIAVDLGY
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgagtcattatgatgtcattgttattggttcaggtattggcggtttagtcacagcaact
caattagcctcaaaagggatcaatgtcttagtattagaaagttacactatccccggcgga
agtgcggggtattttgagcgggaaggataccgttttgatgtgggtgcttccatgattttt
ggttttggcgaaaatggtactactaacttacttacccgtgccttagatgctgttaatcaa
aaaatggagacgatcgccgatccagtacaaattcactatcatttacccaataacctcgat
cttaaagttcatagagattatgacaagtttttacaagaattatacgatcgttttcctgaa
gaagaaaaaggtataaaaagtttttatgatgagtgttggtatgtttttaattgtctcaac
tcgatggagttattatctttagaggaaattcgttacttaactagagtattttttcaacac
cctttatcctgtcttggcttagtcaaatatttacctttaaatgtgggtgatgtagcaagg
aaatatattaaaaatcctgaattgcttaaatttatcgatatggagtgttattgttggtcg
gttgtacctgctgatttaactcccatgattaacgccggaatggtattttccgatcgacac
tatggaggaataaactatcctaaaggaggagtaggtaaaataggagaaactttagcacaa
ggattagaaaagttagggggagaaatccagtatcaagcaagagtaaccgaaattatcctc
gaaggaaatcaagccaaaggagttagattagccaacggcaaagaatattttgccaaaaga
attgtctctaatgctactcgttgggatacttttgataagttaatcgacaaaagtaaaaaa
cccaaaaaagaagtaaaatggcagaaaaattatcgtcaatcacctagttttctaagtctt
catttaggagtggaagccaaagttttagcccatcatcctgaatgtcatcatattatattg
gaaaactggcgcaacttagaagcagagcaaggcacaatttttgtttctatacctacttta
cttgatcccagtcttgcccccgaaggttatcatatcattcatgcctttaccccaagctcg
atcgaatattgggaagaattatcccccacccaatacgagagtaaaaaagaagaagttgcg
gggagattaattgagcgtttagaagttattttccccggattagatgcaggtttagactat
atggaaattggtacacctcgcacccacagaaaatttttaggtagaattaatggtacttat
ggacccattcctgccaaaagactcaatggtttattatcaatgccttttaatcgcactgct
atcaaaaatctttactgtgtgggagacagcacatttccagggcagggtttaaatgccgtc
gctttttctgggtttagttgcgcccatcgtatcgccgttgacttgggctattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (39)   

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