KEGG   Geobacter sp. FRC-32: Geob_0290Help
Entry
Geob_0290         CDS       T00846                                 

Definition
DNA glycosylase/AP lyase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
geo  Geobacter sp. FRC-32
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:geo00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Geob_0290
Enzymes [BR:geo01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Geob_0290
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Geob_0290
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
353609..354388
Genome map
AA seq 259 aa AA seqDB search
MPELPDLTVFAENLGKRVTKKMIRSVTCGRNLRLNVSPRELAESLQDQVIEGVERWGKEI
RFLLGNGKILHVHLMLTGGFVITGKPDKVPFPQLVIGFEDDTSLVVTDEKAMAMAALDPE
KAEASPDALAVTVDELKRLISRFPKAKAKAFLIDQKVMRGIGNAYADEILWEARISPLSL
MGKLTPQTIEVLAEKIPAVLQWAIVSIKERNPGITAGEIRDFLQVHNPSRKTSPTGRPII
KEKIAQKTTYYTDEQKLYV
NT seq 780 nt NT seq  +upstreamnt  +downstreamnt
atgccggagttgcctgatctgactgtttttgccgaaaacctgggtaagagggtaacgaag
aaaatgatacgatcggtgacgtgcgggagaaatttgcgcctgaatgtttctccccgggaa
cttgcagaatcattgcaggatcaggtgatagaaggtgtggaacgctggggaaaggagatc
cggtttctccttggcaacggcaaaatattacacgtccatctgatgctgaccggcggcttc
gttataaccggcaagccggacaaggttccttttccgcagctggtgatcggcttcgaggac
gatacaagccttgtcgtcaccgatgaaaaagccatggccatggcggcactcgatccggaa
aaggcggaagcttcacctgatgccctggcggtaaccgtcgatgagctgaaacgcctgatt
tccaggtttccgaaggctaaggccaaggcgtttctcatcgaccagaaagtgatgcgcggc
ataggcaacgcctatgctgacgagatcttgtgggaagcccgcatctcacccctgtctttg
atgggaaagctgaccccccagaccattgaagtgcttgcggaaaaaataccggcagtcctg
cagtgggccattgtctccatcaaggagaggaatcccggcatcactgccggtgagatccgg
gatttcctacaggtgcataacccttcccgcaaaacatcacccacgggacgaccgatcatc
aaggagaagattgcccagaagacgacctattataccgatgagcagaaactatatgtatag

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