KEGG   Geotalea daltonii: Geob_0681
Entry
Geob_0681         CDS       T00846                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
geo  Geotalea daltonii
Pathway
geo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:geo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Geob_0681 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:geo03021]
    Geob_0681 (rho)
   03019 Messenger RNA biogenesis [BR:geo03019]
    Geob_0681 (rho)
Transcription machinery [BR:geo03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Geob_0681 (rho)
Messenger RNA biogenesis [BR:geo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Geob_0681 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_22 NACHT OB_RNB ATPase_2 AAA_25 S1CSD-TOTE-2 AAA Spore_III_AA ResIII
Other DBs
NCBI-ProteinID: ACM19045
UniProt: B9M0K8
Position
754383..755630
AA seq 415 aa
MNLQELKGKKINELAAIAKGLNIEGASSLRKQDLIFAILNAQTEKNGMIFGEGVLETLPD
GFGFLRAPDYNYLPGPDDIYVSPSQIRRFNLHTGDTVSGQIRPPKEGERYFALLKVESVN
HESPDVARDKILFDNLTPLYPEEKLKLETTPENMSMRVMELIAPIGKGQRGLIVAPPRTG
KTMLIQNIANSIAENHPEVFLIVLLIDERPEEVTDMQRSVNGEVISSTFDEPASRHIQVA
EMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVIPPSGKILSGGVDSNALHKPKRFFGA
ARNIEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMELHLDRKLVEKRTFPAIDINKS
GTRKEELLIEKNSLNRIWILRKVLHPMNVVDSMEFLLSKLDGTKSNQAFLDSMSK
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgaacttacaagaattaaaaggtaaaaaaatcaatgaactggcggccattgccaagggg
ctgaacattgagggggcatcaagcctgcgcaaacaggacctgatttttgccatcctcaat
gcccagaccgagaaaaatggcatgatctttggcgagggggtgctggaaacccttcccgat
ggcttcggttttctccgggcgccggattacaactatctgccggggccggatgatatttat
gtgagccccagtcagatccgccgcttcaatctccataccggcgatacggtttcggggcag
atcaggcctccaaaggagggtgagcgttattttgccctgctcaaggtggagtcggtcaat
cacgaatctcccgatgttgccagggacaagatcctcttcgacaacctcacccccctttac
cccgaagagaagttgaagctggaaacgaccccggaaaacatgtccatgcgggtcatggag
ctgatcgctcccatcggcaaggggcagcgcggcctgatcgtcgcacctccccgaaccggc
aagaccatgcttatccagaacattgccaactccatcgccgaaaaccatccggaagttttc
ctgatagtcctgttaatcgacgaaaggccggaagaggtcaccgacatgcagcggtcggtc
aatggcgaggttatttcatccaccttcgacgagcctgcctcgcggcacatccaggtggcc
gagatggttatcgagaaggccaagcgccttgtggagcacaaacgggatgtggtcatactc
cttgattccattacccgtctggcccgtgcctataataccgtcattcccccttccggaaaa
attctttccggtggtgtggattccaatgccctgcataagccgaaacgctttttcggcgcc
gcccgcaatatcgaagaaggtgggtcgttgaccattatcgctaccgccctggtcgatacc
ggtagcaaaatggacgaggtcatcttcgaagaattcaaaggcaccggcaacatggagctt
catctggatcgcaagctcgtggaaaaacggacctttcctgccatcgatatcaacaagtcc
ggaacccggaaggaagagctgctcatcgaaaagaactccctcaaccgcatctggattttg
cgcaaggttctccatccgatgaatgttgtagacagcatggaatttctcctttcaaaactg
gacggaaccaagagtaatcaggcatttctggactccatgagcaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

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