KEGG   Christiangramia flava: GRFL_0409
Entry
GRFL_0409         CDS       T04640                                 
Name
(GenBank) DNA polymerase III epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
gfl  Christiangramia flava
Pathway
gfl03030  DNA replication
gfl03430  Mismatch repair
gfl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gfl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GRFL_0409
   03430 Mismatch repair
    GRFL_0409
   03440 Homologous recombination
    GRFL_0409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gfl03032]
    GRFL_0409
   03400 DNA repair and recombination proteins [BR:gfl03400]
    GRFL_0409
Enzymes [BR:gfl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GRFL_0409
DNA replication proteins [BR:gfl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GRFL_0409
DNA repair and recombination proteins [BR:gfl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GRFL_0409
SSDB
Motif
Pfam: RNase_T GIY-YIG GIY_YIG_2 DEDDh_C RNase_H_2 Rv2179c-like DNA_pol_A_exo1 T5orf172
Other DBs
NCBI-ProteinID: APU67133
UniProt: A0A1L7I1S4
Position
518734..520107
AA seq 457 aa
MYAILDIETTGGKYNEEGITEIAIYKFDGEKVVDQFISLVNPEQPIQPFVVNLTGINNEM
LRNAPKFYEVAKRIVEITTDCVLVAHNAKFDYRILRTEFRRLGYEFERESLCTVELSKKL
IPGLQSYSLGKLVRALGIPLSDRHRAAGDAQATVKLFKMLLNKDVEKNILKTHIRKEPKR
SLDTKLVHILEELPSSTGVYYFHDENGEIIYVGKAKNIRKRINQHFTNENAKSREMQKKV
ASVSFENTGNELLALLKENQEIKELKPKYNRALKRDIFSHALYHFKDDNGYINLKIGKAS
RTKKSITTFSTLRSAKNSLQAWIEEYELCSRLGGVHNGSGNCFNYTIKSCHGACIEEEPA
EAYNERVEKLITRYSYENQNMILIGRGRDIDEKCAILIEDGEFKGSGYFNLNYQINNLDI
IKSIITPMRNNRDAQHIIQSYLRKKHHFKIVQLSVHE
NT seq 1374 nt   +upstreamnt  +downstreamnt
ttgtacgcaatattagacatagaaactaccggcggaaagtataatgaagaggggatcacc
gagatcgccatctataagtttgacggggaaaaggttgttgaccagttcatcagcctggtg
aatcccgaacagcccattcagccgttcgtggtgaatcttaccggcatcaataatgagatg
ctccgcaatgctcccaaattttatgaggtggcaaaaaggatcgtagagatcaccacagac
tgtgtcctggtggctcataatgccaaatttgattaccgaattttgcgcacagaatttaga
cgactcggttatgaattcgagcgtgaaagcctgtgtaccgtagaactttctaaaaaactg
attcccggtttacaatcttacagccttggaaaactggttcgcgcgctgggaatcccgctg
agcgaccggcatcgtgctgcaggtgatgcacaggcaaccgtgaagttgttcaaaatgctg
ctgaataaggatgtggaaaagaacattcttaaaacccatattcggaaagaaccgaagcgc
agcctggataccaagctggtgcacatcctggaggaactgcccagttctaccggcgtttac
tatttccacgacgaaaatggtgagatcatatatgtgggtaaggccaaaaacatcaggaag
cgcattaatcagcattttactaacgagaacgccaagtcccgtgaaatgcagaaaaaagtg
gcttcagtttcttttgaaaacacgggtaacgagctgcttgcccttctgaaagaaaaccag
gaaatcaaggagctcaaaccaaaatataaccgtgcgctaaaaagggatattttcagccat
gcgctgtatcatttcaaggatgataacgggtatatcaacctgaagatcgggaaggccagc
aggaccaagaaaagcatcacgacctttagcacccttcgttctgccaagaattcattgcaa
gcctggatcgaggagtacgaactctgctcccgccttggcggcgttcataatggcagcggc
aattgcttcaattacactattaaaagctgtcatggcgcctgtatcgaagaggaaccggca
gaggcttataacgaacgcgtagaaaagcttattacccgttattcctatgaaaatcagaat
atgatcctcatcgggcgagggcgcgatattgatgaaaaatgtgcgatcctcattgaagac
ggagagtttaaaggcagcggttatttcaacctgaattaccagatcaacaatctggatatc
attaaatctatcatcactcccatgcgcaacaatcgcgatgcgcagcatatcatccagagc
tacctccggaaaaagcaccattttaaaatcgttcaattatcagttcatgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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