KEGG   Geospiza fortis (medium ground-finch): 102039772
Entry
102039772         CDS       T03755                                 
Symbol
UBP1
Name
(RefSeq) upstream binding protein 1 (LBP-1a)
  KO
K09275  transcription factor CP2 and related proteins
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gfr03000]
    102039772 (UBP1)
Transcription factors [BR:gfr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Grainyhead
    102039772 (UBP1)
SSDB
Motif
Pfam: CP2 SAM_3 SAM_PNT SAM_1
Other DBs
NCBI-GeneID: 102039772
NCBI-ProteinID: XP_005424217
Position
Un
AA seq 523 aa
MLFWHSQPEHYHHHQYPASNNSYLRDVLALPIFKQEDSSLPQENETKHPPFQYVMCAATS
PAVKLYDETLTYLNQGQSYEIRMLDNRKAGDIPEINGKLVKSIIRVVFHDRRLQYTEHQQ
LEGWKWNRPGDRLLDLDIPMSVGVIDIKTNPSQLNAVEFLWDPTKCTSAFIQVHCISTEF
TPRKHGGEKGVPFRIQVDTFKQTENGEYTDHLHSASCQIKVFKPKGADRKQKTDREKMEK
RTAHEKEKYQPSYDTTVLTEMRLEPIIEDAVEHEQKKSSKRTLPADYGDSLAKRGSCSPW
PDTPTTFVNNSPTPAPTFTSAQHNTYSVPDSNSSSPNHQGDGTSQGSGDQLHPSATIQET
QQWLLKNRFSAYTRLFSNFSGADLLKLTREDLVQICGPADGIRLYNALKSRSVRPRLTIY
VCQEPLRSIQLERQDAGSTDSNGAIYVYHAIYLEEMAASEVTRKLALAFNIPLHQINQVY
RQGPTGIHILVSDQMVQNFQDESCFLFTTIKAENGEGFHIILK
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgcttttctggcacagccagcctgaacattatcaccaccaccagtatcccgccagtaac
aacagctacttgcgtgatgttttggcgctgcctattttcaaacaggaagattccagcctt
ccacaagaaaatgagaccaaacatccacctttccagtatgttatgtgtgctgcaacatct
ccagcagtaaaattatatgatgaaactctcacatacttgaatcaaggtcagtcctatgag
atccggatgctagataatcggaaagctggagacataccagagatcaatggaaaactggtg
aagagcattataagagtcgtgttccatgacagaaggttgcagtacacagagcaccagcag
ctagagggttggaagtggaaccgccctggggacagactgctcgacttagatattccaatg
tctgtgggagtcattgatatcaagacaaatcctagccagctcaacgcagttgaattttta
tgggatccaacaaaatgtacatctgcttttattcaggtacattgtatcagcactgaattt
acacctcgtaaacacggaggagagaaaggagttccttttagaattcaggttgacaccttt
aaacagactgagaatggagaatatacagatcatctgcattcagccagttgtcaaatcaaa
gtttttaagcccaaaggagcagacagaaaacagaaaacagacagagaaaagatggaaaag
cgaactgcacatgaaaaagagaagtatcagccttcatatgacaccacagttcttacagag
atgaggcttgagcctataattgaagatgcagttgaacatgagcagaaaaagtccagcaag
cggactttgccagcagactacggtgattctctggcaaagcgaggcagttgctcaccatgg
ccagatactcctacaacatttgtaaacaacagtcctactcctgctccgactttcacctct
gctcagcataacacctacagtgtcccagacagcaattcttcctccccaaatcatcaagga
gatggaacatctcaagggtcaggagatcagcttcatccttcagccacaatccaggaaact
cagcaatggttgctcaagaataggttctctgcctatacaaggcttttttcaaatttctca
ggtgctgatttattaaagctgacaagagaagatctggtacaaatctgtggtccagccgat
ggaattcggctgtataatgcactgaaatccaggtccgtgaggccccgtttaacaatctac
gtgtgccaggagcccctccggagcatccaactggaacggcaggacgcgggcagcacagac
agcaacggtgcaatatacgtatatcatgcaatctacttagaggagatggcagcctcagaa
gtcacacgcaagcttgctttggcatttaatattcctttgcatcagatcaaccaagtttac
agacagggtcccacaggcatccacattctcgttagtgatcagatggttcaaaactttcaa
gatgagagttgtttcttattcaccacaataaaagctgaaaatggagaaggcttccatata
attctgaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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