KEGG   Gallus gallus (chicken): 100859792
Entry
100859792         CDS       T01006                                 
Symbol
UBTF
Name
(RefSeq) nucleolar transcription factor 1 isoform X3
  KO
K09273  upstream-binding transcription factor
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gga03000]
    100859792 (UBTF)
   03021 Transcription machinery [BR:gga03021]
    100859792 (UBTF)
Transcription factors [BR:gga03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   UBF
    100859792 (UBTF)
Transcription machinery [BR:gga03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    UBF
     100859792 (UBTF)
SSDB
Motif
Pfam: HMG_box HMG_box_5 HMG_box_2 ScsC_N Chlor_dismutase
Other DBs
NCBI-GeneID: 100859792
NCBI-ProteinID: XP_015128693
CGNC: 63361
Ensembl: ENSGALG00000042976
UniProt: A0A8V1A338
Position
27:5437055..5451549
AA seq 760 aa
MNGDTECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAF
KDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYF
RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR
EDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDATTKEVKESLGKQWSQLSDK
KRLKWIHKALEQRKEYEEIMRDYIQKHPELNLSEEGITRSTLTKAERQLKDKFDGRPTKP
PPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIELLR
FLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIFSEE
KRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHGSDKEERGK
LPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEATWNNMEKKEKLMWIKKAAEDQKR
YERELSEMRAPPCSTNSAKKVKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEI
GSRWQRISQGQKDHYKKLAEEQQKQYKVHLDIWLKSLSPQERAAYKEHTSNKRKSIGKIR
GPNPKMKPTMQSKSESEDDDDDEEDEDDDDEDEDDDDDNGDSSEEGGDSSESSSEEESED
GDENDEDDEDEDDEDEDDNDSEGSSSSSSSSGDSSDSDSN
NT seq 2283 nt   +upstreamnt  +downstreamnt
atgaacggcgacaccgagtgccctgcagacttggaaatgacagctcccaaaaaccaagac
cgctggtcgcaggaggacatgctgactctgctggagtgcatgaagaacaacctgccttcc
aacgacgggagcaagttcaagaccaccgagtcccacctggactgggagaaagtggctttc
aaggacttctcgggggagatgtgcaagatgaagtggatggagatctccaacgaggtgagg
aaatttcggaccctcacggagctcatcatggatgccgaggagcacgtgaagaatccttac
aagggcaaaaagctcaagaaacaccccgacttccccaagaagcccctgacgccctacttc
cgcttcttcatggagaagcgagccaaatacgccaagcttcaccccgaaatgagcaacctg
gatctcaccaagatcctgtccaagaaatacaaggagcttcccgagaagaaaaagatgaaa
tacatccaggacttccagcgagagaagcaggagtttgagaggaacctggcgaggttcagg
gaagatcacccggacctcatccagaacgccaagaaatccgacgtccccgaaaagcccaaa
accccccagcagctgtggtacaaccacgagaagaagatctacctgaaagtgcgtccagat
gccaccacgaaggaggtgaaagagtcgctgggcaagcagtggtctcaactctccgataaa
aagaggctgaaatggattcataaggccctggaacagcggaaggagtacgaggagatcatg
cgggactacatccagaagcaccccgagctgaacctcagcgaggagggcatcacccgctcc
acgctcaccaaggctgagcggcagctcaaggataagttcgacgggcgacccaccaaaccg
cccccgaatagctactccctgtactgcgcagagctgatggccaacatgaaagacgtgccc
agcacggagcggatggtgctgtgcagccagcagtggaagctgctctcccagaaggagaaa
gatgcataccacaaaaagtgcgaccagaaaaagaaagactacgagatcgagctgctccgc
ttcctggagagcctgcccgaggaggagcagcagcgggtgctgggcgaggagaagatgctg
ggcagcaaccggaaaggggcgacgagtcccgcgtccaaaaagtcctcaccagagaccggc
aaggccagctccgagaagcctaagcggcccatctcggccatgttcatcttctcggaggag
aagcggaagcagctgcaggaggagaggccggagctgtcggagagcgagctgacccggctg
ctggcacgcatgtggaacgacctctccgagaagaagaaggccaaatacaaggcgcgggag
gcggccatgaaggcgcagtcggagaagaagcacggctccgataaggaggagcgcgggaag
ctgcccgagtcccccaaaacggccgaggagatctggcagcagagcgtcatcggggactac
ctggcacgtttcaagaacgaccgggggaaggcgctgaaggccatggaggccacttggaac
aacatggagaagaaggagaagctgatgtggatcaagaaggcggcggaggatcagaagcga
tacgagagggagctgagcgagatgagggcccccccgtgctccaccaactccgccaagaag
gtgaagttccagggagagccaaagaaaccccccatgaacggttaccagaagttctcccag
gagctgctgtccaacggggagctgaaccacctccctctgaaggagcggatggtggagatc
ggcagccgctggcagcgcatctcgcagggccagaaggaccactacaagaagctggcggag
gagcagcagaagcagtacaaagtgcacctcgacatctggctcaagagcctctcgccccag
gagcgggcagcctacaaggaacacacctccaacaaacgtaagagcatagggaagatccgg
ggccccaaccccaagatgaagccaacgatgcagtccaagtcggagtcagaggacgacgac
gacgacgaagaggacgaggatgatgacgatgaagatgaggacgacgacgacgacaacggg
gactcatcggaggagggcggcgattcctcggagtccagcagtgaggaggagagcgaggac
ggcgacgagaacgatgaggacgacgaggatgaggacgatgaagatgaggacgacaacgac
tcggagggcagcagcagctcctcctcctcctccggggactcctccgactccgactccaac
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (11)   
   UniProt (1)   
   RefSeq(pep) (10)   
DNA sequence (12)   
   RefSeq(nuc) (10)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (47)   

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