KEGG   Gallus gallus (chicken): 373918
Entry
373918            CDS       T01006                                 
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1
  KO
K05699  actinin alpha 1/4
Organism
gga  Gallus gallus (chicken)
Pathway
gga04510  Focal adhesion
gga04520  Adherens junction
gga04530  Tight junction
gga04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:gga00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    373918 (ACTN1)
   04520 Adherens junction
    373918 (ACTN1)
   04530 Tight junction
    373918 (ACTN1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    373918 (ACTN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gga04131]
    373918 (ACTN1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gga04812]
    373918 (ACTN1)
   04147 Exosome [BR:gga04147]
    373918 (ACTN1)
Membrane trafficking [BR:gga04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    373918 (ACTN1)
Cytoskeleton proteins [BR:gga04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     373918 (ACTN1)
Exosome [BR:gga04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   373918 (ACTN1)
  Exosomal proteins of colorectal cancer cells
   373918 (ACTN1)
  Exosomal proteins of bladder cancer cells
   373918 (ACTN1)
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_7 EF-hand_6 EF-hand_1 EF-hand_8 XisI AIF-1 Uds1 EF-hand_11 U3_assoc_6
Other DBs
NCBI-GeneID: 373918
NCBI-ProteinID: NP_989458
CGNC: 48956
Ensembl: ENSGALG00000042458
UniProt: P05094
Structure
Position
5:28427294..28508906
AA seq 888 aa
MDHHYDPQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDF
RDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGN
VKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWYQRKTAPYKNVNIQNFHISWKDGLGF
CALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIM
TYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLEN
RAPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGK
MVSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQ
KDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKI
CDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVH
TIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQE
INGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIE
MHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQ
LLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMG
YNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYIT
VDELRRELPPDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGESDL
NT seq 2667 nt   +upstreamnt  +downstreamnt
atggatcatcactacgacccgcagcagaccaacgattacatgcagccggaggaggactgg
gaccgggacctgctcctcgacccggcttgggagaagcagcagcggaagacatttacagca
tggtgtaattctcacctccgcaaggctgggacacagattgagaacatagaggaagatttc
agggatggtcttaaactcatgttacttctggaagtcatttcaggtgaacgtttggctaag
cccgaaagaggcaaaatgcgagtgcacaaaatatccaacgtgaacaaggccttggatttc
attgccagcaaaggagtcaaactagtatcaattggagcagaagaaattgtggatggcaac
gttaaaatgactcttggaatgatctggaccatcatccttcgttttgccattcaggatatc
tcagttgaagagacatctgctaaagaaggacttttgttatggtatcagaggaagacagct
ccctacaaaaatgtaaacatccagaacttccatatcagttggaaagatggccttggtttc
tgcgctttaattcacagacatcgtccagagctcattgattacgggaagctacgaaaggat
gatcctctcactaatctaaacacagcctttgatgtagctgaaaaatatctggatatcccc
aagatgctggatgcagaagacattgttggaactgcccgtcctgacgagaaagccatcatg
acctatgtttctagcttctaccacgccttctcaggagcccagaaggcggagacagcagca
aatcgtatttgcaaggttctggcagtcaaccaagaaaatgaacagctcatggaagactat
gaaaaactggccagtgatctgctggagtggatccgtcgcaccatcccctggctggagaac
cgggcaccagagaacaccatgcaagccatgcagcagaaactggaggacttccgggactac
cgccgcctgcataagccccccaaagtccaagagaagtgccaacttgagatcaatttcaac
accttgcagaccaagctacggctcagcaacaggccagccttcatgccttcagaagggaaa
atggtttcagatataaacaatgcctggggtggcctagagcaggctgagaagggctatgag
gagtggttgttgaatgagatccggaggctagagaggctggatcacctggcagagaagttc
cggcagaaagcatctattcatgagtcctggacagatggtaaggaagcgatgctgcagcag
aaggattacgaaactgctaccctctcggagataaaggccctgctgaagaaacacgaggcc
ttcgagagcgacctggctgcacaccaggaccgcgtggaacagattgctgctattgcacaa
gagctgaatgagctggactattatgactctccgagtgtcaatgccaggtgccagaagatc
tgtgatcagtgggataatctgggtgccctaacccagaaacgtagagaagctttagagagg
acagagaagctactggaaacaattgaccagttgtacctggaatatgccaaacgagctgcc
cccttcaataactggatggaaggggccatggaggacctgcaggacacgttcattgttcac
accattgaggagatccagggattgaccacagcccacgaacagttcaaagccactttgcca
gatgccgacaaggagcgacaggccatcctgggaatccacaatgaagtctcaaagattgtc
cagacgtaccacgtcaacatggcaggaacgaacccttacactacaatcaccccacaggag
atcaatggcaaatgggaacacgtgcggcagctggttcctagaagggatcaagccctaatg
gaagaacatgctcgccagcaacaaaatgagcgacttcgtaagcagtttggtgcacaagcc
aatgtcattggtccctggattcagaccaagatggaggagattggccgcatttcaatagag
atgcacgggactctggaggaccagctcaaccacttgcggcagtatgagaaaagcattgtg
aattacaaaccaaagatcgaccagttggaaggagaccaccaacagatccaggaggcgctt
atctttgacaacaagcacaccaactacaccatggagcatattcgtgtgggctgggagcag
ctattaacaacaattgctagaaccattaatgaagtggaaaaccagattctgacccgtgat
gccaaaggaataagccaggaacagatgaatgagttccgagcctctttcaaccattttgac
aggaagaagactggtatgatggattgtgaagatttccgagcctgccttatctccatgggt
tacaatatgggagaggcagagtttgcccgcatcatgagcattgtcgatcctaatcgcatg
ggtgtagtgacgttccaggccttcattgacttcatgtcccgggaaacagcagatacagat
actgctgaccaggttatggcttctttcaagatcctggctggagataagaactacatcact
gtggatgagttacggcgggagctgcctcctgatcaggctgagtactgcattgctagaatg
gcaccctacaatggccgtgatgctgtacccggtgccctggactacatgtcgttctccacg
gcgctctatggcgaaagtgacctttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (54)   
   KEGG ORTHOLOGY (1)   
   RefGene (48)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (13)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (11)   
DNA sequence (25)   
   RefSeq(nuc) (11)   
   GenBank (7)   
   EMBL (7)   
3D Structure (1)   
   PDB (1)   
Protein domain (12)   
   Pfam (12)   
All databases (114)   

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