KEGG   Gallus gallus (chicken): 373983
Entry
373983            CDS       T01006                                 
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
gga  Gallus gallus (chicken)
Pathway
gga03440  Homologous recombination
gga03460  Fanconi anemia pathway
gga04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    373983 (BRCA1)
  09124 Replication and repair
   03440 Homologous recombination
    373983 (BRCA1)
   03460 Fanconi anemia pathway
    373983 (BRCA1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gga01009]
    373983 (BRCA1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gga04121]
    373983 (BRCA1)
   03036 Chromosome and associated proteins [BR:gga03036]
    373983 (BRCA1)
   03400 DNA repair and recombination proteins [BR:gga03400]
    373983 (BRCA1)
Enzymes [BR:gga01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     373983 (BRCA1)
Protein phosphatases and associated proteins [BR:gga01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     373983 (BRCA1)
Ubiquitin system [BR:gga04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    373983 (BRCA1)
  Multi subunit Ring-finger type E3
   BRCC complex
    373983 (BRCA1)
Chromosome and associated proteins [BR:gga03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     373983 (BRCA1)
DNA repair and recombination proteins [BR:gga03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     373983 (BRCA1)
    BRCA1-A complex
     373983 (BRCA1)
    BRCA1-B complex
     373983 (BRCA1)
    BRCA1-C complex
     373983 (BRCA1)
    BRCA complex
     373983 (BRCA1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     373983 (BRCA1)
SSDB
Motif
Pfam: BRCT_assoc BRCT zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 zf-RING_UBOX BRCT_2 zf-RING_2 zf-C3HC4_3 BRCT_3 zf-Nse zf-RING_6 zf-RING_5 zf-RING_10 zf-MIZ RTT107_BRCT_5 TRAF3_RING
Other DBs
NCBI-GeneID: 373983
NCBI-ProteinID: NP_989500
CGNC: 2006
Ensembl: ENSGALG00000002781
UniProt: Q90Z51
Position
27:complement(7969221..7990488)
AA seq 1749 aa
MDLSVIAIGDVQNVLSAMQKNLECPVCLDVIKEPVSTKCDHVFCRFCMFKLLSRKKKGVI
QCPLCKTEVTKRSLKENSRFKQLIEGLLEAISAFELDTGVKFLSSRYFPKTSTEVATAEL
LGNNSSVIQSKGFRNRKRGAKENRQDSCTLEANVDPQLTDNRVKGSSVRSKKQKCGIEKG
VLIELGTDSSEEHFILASSTGLEDKEELEEPKSAEKYGSSCNTQPLKLGAKEIILPNVIG
ETDFLKEALDKKSMLNITEHIKCNQVNTIEGQSSPLNVFDADLLTGQRDGIGNASPLKND
TSFLKNAEEMDVEETQCSHKNQELDLEDSSEGRLDKIKEKDICVPSVEDVEMCEPMDDSL
LEKEPPVEKPLQPKIPHCPTLNEVSTKGLNQSIQKVNEWFSKSSRILSSSSSQNDHAEAT
DASGEGDISLSDKDSCISEKTNPIVDSVEFAVIERNKRWTKQTTYSIEDKIFGKTYERGR
KSNPSTILRDILPATKKEDAAAEEGCLNNSRKDRLKRKRKSACILQPEDFIKKKDLEEAD
RCPQGIKSSLGDAEKEKCDENSAVKENPLLEKRKGSTLAEFKERGLQWKNAAEKVSGKCS
DGQLELNNSDQKSTKNACSTAKGCRHSTRTRCAIHLVDRNPGSFDLAEPLINSYPSNEEP
SKADCERRQVRRSRRLQLLSEEITKETGKMRVIKEAKNSDSGPEGSVFGVERNVLVHNSQ
CKDLRKQQDILSYMSLADRNGADLEANGIQISSKNSDDMAKNRSFFNPTFSCQLSNFNSP
SSKAGSQEGEMLGKLFLPQSPSKTVLHAASILTEEKRSWSCTVFSQDKGCCSRNVPKDFR
IGKSPMAKNASEFTMEAEDSELDMQYLRNIFRSSKRQSFSLYPTPMKACTTDDVASEKLN
TSCPDQVEERNSKYLKTENLQEEKTTAENLSSVCEKFETCESACVSPVSCFVSSAACVHT
VENQDVSKVANHGNLTTLLRICAARNEDGNRPQKGEQGSEKTLSTGIGVESKLRLSPVRS
NRSQSDQSNTEEHAFQRTGLNAVSETYFSSESNQVEKAEVVDDKGLMQHFQPSPMLCPTA
CQQNPAEFNCELTEKKIITRERSLVKGNEERVIQTVSTGLSEFSVREALEESLKGHSDFT
DLSETPDGLLCSDNDTEESASFYVTNRKDTSAVFVKRSGAAWVKEVNDSVVSCKPRSEGI
QRFRRRAQKLQSSDEESSDDEDLPSFQELMFGKSVSTPLQIQKQVTSVVQSSANPSTLPC
SECLNENNEQKTLEAALSNECASPSQESECSVNLFSSQSNMSEESVDGAQELKKTLTQVS
NVKKSKEAPQSCSGGLKRLKNNLNDEYQEDPNMGANLGEASGYDSETSRVEDSHEPFSQG
EILSTQQKNAMQNNLKKLQQEMAVLEAVLKQHGSQDAEVLPLCRELPYCSIGGTLGLERM
RQETENVSEHDSETKLTKASVLPVLCGNVTKNPNSSSFSVKHPCPQTAEATDSSAVAQGD
NKSNVQVCKSKRSVCFPTSVLHNVAGKENAASSGTTCRTEMSIVASGLNQSEHLMVQKFA
RKTQSTFSNHITDGTTHVIMKTDEELVCERTLKYFLGIAGRKWVVSYQWIIQSFKEGRIL
DEEHFEVKGDVINGRNHQGPKRARQSPAEKIFKDFEICCCGPFTDMTTGHLEWIVELCGA
SVVKQLHLFTHKVNSTAVVVVQPDAWMEGTSYEAIQRKNNVAVVTREWVLDSVACFECQE
LDAYLVSQD
NT seq 5250 nt   +upstreamnt  +downstreamnt
atggacttgtcagtgattgccattggagacgtgcaaaatgtgctttcagccatgcagaag
aacttggagtgtccagtctgtttagatgtgataaaagagccggtttcaacaaaatgtgat
cacgtattctgcagattctgtatgtttaaacttctcagcagaaagaaaaaaggtgtaata
cagtgccctctgtgtaagactgaagttaccaagagaagtctcaaagaaaattccagattt
aagcagctaattgaaggattgttggaagctatcagtgcgtttgagcttgatactggagta
aaatttttaagcagtcgttattttcctaaaacatccacagaagttgctactgctgagctc
ctgggtaataacagttctgtcatccagagtaagggtttcagaaacaggaaaagaggcgct
aaagaaaatagacaagacagctgtaccttggaagctaatgtggatccacagcttacagac
aacagggtcaaagggtcttctgtaagaagtaaaaaacagaaatgtggcattgaaaaaggt
gtacttatagagcttggcactgattcatctgaggagcattttatactggcaagcagtact
gggttagaagacaaagaagagctagaagaacctaagagtgctgagaagtatggaagttct
tgcaatacacagccactcaagctaggtgctaaagaaataattttaccaaatgtcataggt
gaaactgatttcttgaaggaagctttggacaagaaaagcatgctgaacatcactgaacac
atcaaatgtaaccaagtaaatacaattgagggccagagttctcctttaaatgtttttgat
gcggacctactcacagggcagcgtgatggaataggtaatgccagtcccttaaagaatgac
acatctttcttgaagaatgcagaagaaatggatgtggaggaaactcagtgcagtcataaa
aaccaagagcttgacttagaagatagctcagaaggtagactggataaaataaaagaaaag
gatatttgtgtgccaagtgtggaagatgtagaaatgtgtgaacccatggatgattctcta
cttgaaaaagaacctcctgtggagaaaccacttcagccaaagatacctcattgtcctacc
ctgaatgaggtctctactaagggactgaatcaaagcattcagaaagtcaatgagtggttt
tcaaaaagcagtaggattttatcttccagttcatcccagaatgatcatgctgaagcaact
gatgcttcaggtgaaggagatatttctctatcagataaagattcgtgcatttcagagaag
accaaccctatagtagattctgtggaatttgcagtgattgaaagaaacaagagatggaca
aagcaaacaacatatagtatcgaagacaaaatatttgggaaaacatatgagagagggagg
aaatcaaatccctctactatcttgagagacattttgcctgctacaaaaaaagaagatgca
gctgctgaagaggggtgcttgaataattccagaaaagaccgactaaaacgaaaaaggaag
tctgcctgtatccttcagcctgaagacttcattaagaagaaagatctagaagaggcagat
agatgcccccagggcattaagtccagtcttggagatgctgagaaggaaaaatgcgatgaa
aattctgctgttaaggagaatcccctccttgaaaaaagaaagggtagtacactagcagaa
ttcaaggagagaggattacagtggaaaaatgctgctgaaaaggtgtcaggcaagtgctct
gatggacagctggaactgaataattctgatcagaagagcactaagaatgcatgttctaca
gcaaaaggatgcagacattcaactagaaccaggtgtgctatacacttagttgatagaaac
ccaggttcctttgatctagctgagccactcattaatagctatccaagcaatgaagagcca
agcaaagccgattgtgagcgaagacaagtcagacgcagcaggaggcttcagctactttct
gaagaaattacaaaagaaacaggaaaaatgagagtaattaaggaagcaaaaaattctgac
agtggtccagaagggtctgtctttggagttgaaaggaatgtgttagttcacaattcccag
tgcaaagacctgaggaagcagcaggatatattgagttacatgtcactcgctgatcggaat
ggtgctgatctggaagcaaatggaatacagattagttcaaagaattcagatgatatggca
aaaaacagaagtttcttcaatcctacattttcttgtcaactttcaaattttaattcccct
tcatccaaagcaggttctcaagaaggtgaaatgctaggtaaacttttcctcccacagtct
ccttcaaagactgtgctgcacgctgcttccatcctgactgaagagaagaggtcttggtca
tgtactgttttttcccaggacaaaggatgctgttcacggaatgttcccaaggacttcaga
attggaaagtcaccaatggctaaaaacgcttcagaatttaccatggaagctgaagacagt
gagttagacatgcagtatctgagaaatatatttaggagttcaaaacggcagtcttttagt
ctttatcctactcccatgaaggcatgtaccacagatgatgttgcatctgaaaaattaaat
acttcatgtcctgatcaggtagaagaaaggaatagtaaatatttaaagacagaaaattta
caagaagagaaaacaactgcagaaaatttgagtagtgtttgtgagaagtttgagacctgt
gaatctgcttgtgttagtcctgtgtcgtgctttgtcagcagtgctgcatgtgtgcacact
gtggagaatcaagatgtgtcaaaggttgcaaatcatgggaatctgacaacactattaaga
atatgtgctgctaggaatgaagatggaaacagaccacaaaagggagagcagggtagcgaa
aagacattgtctactggtataggggtagaaagcaaactgagactgagtccagtcagaagc
aacagaagtcaaagtgatcagagtaatacagaagagcatgctttccaaagaacaggtctg
aacgcagtcagtgaaacatacttcagttcagaaagcaatcaagtggaaaaggctgaagtt
gttgatgacaaaggactaatgcaacattttcaacctagtccaatgctttgtcctacagct
tgtcaacaaaatccagctgaattcaactgtgaactcactgaaaaaaaaattatcacaaga
gagagaagcctggtaaagggcaatgaagagcgagtaatccagactgtcagcacagggttg
tcagagttttcagttagagaggcactagaagaatctcttaaaggccacagtgattttaca
gatctgtctgaaacccctgatggcttactgtgctctgacaatgatactgaagaaagtgcc
agcttttatgtaactaataggaaagacacatctgctgtgtttgtaaaaagaagtggtgct
gcctgggtgaaagaagtaaatgattcagttgttagctgtaagccaagatctgaaggtatt
caaaggtttcggagaagagcccagaaactgcaatcttcagatgaagaatctagtgatgat
gaagatttaccaagttttcaggaattaatgtttggcaaatcagtaagcacccctttgcag
atccaaaaacaggtgacatctgtggtacagtcttcagcaaatcccagcacattgccttgc
agtgaatgtcttaatgaaaataatgagcagaaaacacttgaagctgccctaagtaatgag
tgtgcttcaccaagccaggagtcagaatgctctgtgaacttattttcttcccagtccaac
atgtctgaagaatcagttgatggagcacaggagctgaagaaaactttaacacaagtgagc
aacgtaaagaagagtaaagaagctcctcagagttgcagtggagggctgaagagactcaaa
aataacttgaatgatgagtaccaagaagatccaaacatgggggcaaacctaggtgaagca
tctggatatgacagcgaaacaagtcgtgtagaggattcacatgaaccattttctcagggt
gaaattctttctacgcagcagaagaatgctatgcagaacaacctaaaaaagctacaacaa
gaaatggctgtacttgaagcagtgctaaagcagcatggaagtcaggacgctgaggtactg
cccttatgtagggaactgccatattgcagtattggaggaacacttggactggagcggatg
agacaagaaacagaaaatgtgtctgagcatgactctgaaaccaagctaactaaggcatcc
gttttaccagttctctgtggaaatgtgaccaagaatccgaatagctcttccttctctgta
aagcatccttgccctcaaactgcagaagcaacagatagttctgctgtagctcagggtgat
aacaaaagcaatgttcaagtatgtaaatcaaagagaagtgtatgttttcctacatctgta
ctgcacaacgtagctgggaaagaaaatgctgcaagttcaggtacaacttgtaggacggaa
atgtcaattgtggcatccggtctgaaccaaagtgaacatttgatggtccagaagtttgcc
agaaaaactcagagcactttctctaatcacattactgatggaacaacccatgtcataatg
aaaacagatgaggagctggtatgtgaacggacattgaagtactttctgggtatcgcagga
agaaaatgggtagttagttaccagtggataattcaatcttttaaagaaggcaggatactg
gatgaggagcactttgaagttaaaggagatgtaatcaatggcagaaatcaccagggtcct
aagagggctaggcaatctccagctgaaaagatctttaaagactttgagatctgctgctgt
ggacctttcactgatatgactacaggacatttagagtggatagtggagctttgtggtgcc
tctgtagtgaaacaacttcatctgttcacccataaagtaaattccactgctgttgttgtt
gtgcagccagatgcttggatggaaggcacaagttatgaagcaatccagcggaagaacaat
gttgctgtggtgactcgagagtgggtgttagatagcgttgcttgctttgagtgccaggag
ttggatgcttaccttgtgtcccaagactga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (11)   
   RefSeq(nuc) (5)   
   GenBank (3)   
   EMBL (3)   
Protein domain (17)   
   Pfam (17)   
All databases (97)   

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