KEGG   Gallus gallus (chicken): 395784
Entry
395784            CDS       T01006                                 
Symbol
CLIP1
Name
(RefSeq) CAP-Gly domain-containing linker protein 1
  KO
K10421  CAP-Gly domain-containing linker protein 1
Organism
gga  Gallus gallus (chicken)
Pathway
gga04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:gga00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    395784 (CLIP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gga03036]
    395784 (CLIP1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gga04812]
    395784 (CLIP1)
Chromosome and associated proteins [BR:gga03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     395784 (CLIP1)
Cytoskeleton proteins [BR:gga04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     395784 (CLIP1)
SSDB
Motif
Pfam: CAP_GLY CLIP1_ZNF
Other DBs
NCBI-GeneID: 395784
NCBI-ProteinID: NP_990273
CGNC: 3295
Ensembl: ENSGALG00000004467
UniProt: O42184
Position
15:complement(6112206..6174094)
AA seq 1433 aa
MSMLKPSGLKAPSKTIKHGSTLLKAPASVATAPAEKAPSSEKSSSTTTADAHDDFVDDFR
VGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLRGIFT
RPSKLSRKVLTEDEANGTQTAHASRATSPTSTSTASAVSASPAALLPSGIPQKTSPLAAK
EHSTPSQFSNLSKTASGSVSNLSEAGSLKKGERELKIGDRVLVGGTKAGVVRFLGETDFA
KGEWCGVELDEPLGKNDGAVAGTRYFQCQPRYGLFAPVHKVTKIGFPSTTPAKAKTTVRK
VVATPAALKRSPSASSLSSLSSVASSVSSKPSRTGLLTETSSRYARKISGTTALQEALKE
KQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVEA
ADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTK
ADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLESSKHIDDVDTSLSLLQ
EISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLD
HANKENSDVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAEFAELKTQMEKVKLDY
ENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMED
TLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEI
QKLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLL
KEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREERE
QQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQ
KNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEM
ITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTME
KVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENK
KVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQ
LLEMKKRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTL
QSVVKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTSPSGDIAANLLQDESAEDKQQEID
FLNSVIVDLQRRNEELNLKIQRMCEAALNGNEEETINYDSEEEGLSKKTPRLFCDICGCF
DLHDTEDCPTQAQMLEEPPHSTYHGSRREERPYCDTCEMFGHWTADCNDDETF
NT seq 4302 nt   +upstreamnt  +downstreamnt
atgagtatgttaaaaccgagtggacttaaggctccatcaaagaccatcaagcatggaagt
acgttactgaaagcacctgcatctgttgcaactgctccagcagaaaaggcaccttccagt
gaaaagtcctcaagcacaaccactgcagacgcacacgacgactttgtggatgatttcaga
gttggggagcgtgtttgggtcaacggaaataaacctggctttattcagttccttggtgaa
acgcagtttgctccaggacaatgggcagggattgttctagacgaaccaattggtaaaaac
gatggctctgtggctggagttcgctatttccagtgtgaacccttgaggggaatatttaca
agaccatcaaaattgtcaagaaaagtgctgacagaagatgaagccaatggtactcagaca
gctcatgcatctagagctacatcaccaacctccacatcaactgccagtgcggtgtccgca
tcccctgctgcacttctcccgtcaggaatcccacagaaaacatcaccactcgctgctaaa
gaacattctactccttctcagtttagcaatctttcaaaaactgcaagtggatctgtatct
aatctgtctgaggctggatcactaaagaaaggagaaagggagctcaaaatcggagatcga
gttctggtgggtggaacaaaagctggagttgtgcgtttcttgggagaaactgactttgct
aaaggagaatggtgtggggtagagctggatgaacctctgggaaagaatgatggagctgtt
gctggaacaagatactttcagtgtcagccaagatacggtttgtttgctccggtccacaaa
gttacaaagattggattcccatcgactaccccggcaaaagcgaagacaactgtgcgaaaa
gtggttgcgactcccgcagccctgaaacgtagcccgagtgcatcttccctgagctctctc
agttctgtggcatcttcagtaagcagcaagccgagccgtacaggactattgacagaaaca
tcctcccggtatgcaagaaagatttctggtaccacagccctgcaggaggcactgaaggag
aaacagcaacatattgaacagctcctggcagaaagggacctggagagggcagaagttgca
aaagcaaccagtcacgtgggggaaatagagcaggaattagcacttgttcgagatggacac
gaccggcatgtactggagatggaagcaaaaatggaccagctgcgagccatggtagaggct
gctgacagggagaaagtggagcttctcaatcagctcgaggaagagaaaaggaaggttgaa
gatcttcagttccgagtggaagaagaatccattaccaaaggagacctagagacgcagacc
aaactggagcatgcccgcattaaggagcttgaacagagcctgctctttgaaaagaccaaa
gctgacaaactccagagggagttagaagacactagggtggctacagtatcagaaaaatct
cgcatcatggaactagaaagagatctagcattgcgggtgaaggaagtagctgagcttcga
gggagattagagtctagtaaacacattgatgatgtggatacttctctttcattgttacaa
gaaataagttctttgcaagaaaaaatggcagcagctggcaaagagcatcagcgagagatg
agctctctgaaagagaagtttgaaagcagtgaagaagcgctgcggaaagagatcaaaaca
ctttcagcttcaaatgagagaatgggaaaagaaaatgaatcattgaaaactaagcttgat
catgccaacaaggagaattcagacgtaatagagctgtggaaatcgaagctggaatctgca
attgcttcccatcagcaagcaatggaagaactgaaagtttctttcaacaaaggtgtaggg
gctcagacagcagaatttgcagagttaaaaactcagatggagaaggttaaattagactac
gaaaatgaaatgtcaaatctaaaactgaagcaggaaaatgaaaaatctcagcatttaaag
gagattgaagcactgaaggcaaaattgctggaggtcacagaggaaaaagagcaaaccctg
gaaaacctgaaggccaaactggaaagtgtggaagatcagcatctagtagaaatggaagac
actttaaacaaattacaggaagctgaaataaaggtaaaggagctagatgtactgcaagcc
aagtgcaatgaacaaaccaaacttattggtagtcttacacaacagatcagagcttctgaa
gaaaagcttttggaccttgctgcacttcagaaagccaattctgaaggtaaattggaaatc
cagaaacttagcgagcagcttcaggcagctgagaaacagatacagaatttagagactgaa
aaggttagtaatctgaccaaagaactgcagggcaaagagcaaaagcttcttgaccttgag
aaaaatttgagtgcagtaaatcaagttaaagattctttggaaaaggaacttcaacttttg
aaagaaaaatttactagtgcagttgatggagcagaaaatgctcaacgcgctatgcaagaa
acaataaacaaactaaaccaaaaagaagaacagtttgcacttatgtcttcagaactggaa
caactgaaatctaatttgactgtgatggagactaaactgaaggagagagaagagagagaa
cagcaactgactgaagctaaagtcaaactagaaaatgatattgcggagatcatgaagtca
tcaggagacagctctgcccagcttatgaaaatgaatgatgagctacggttaaaagaaagg
cagttggagcaaatacaacttgagcttacaaaagcaaatgaaaaggctgttcagcttcag
aaaaatgtggagcagacagcacagaaagctgagcagagtcagcaagaaactctcaagact
catcaagaagagctgaaaaaaatgcaggatcaactaacggacatgaaaaagcaaatggag
accagtcaaaatcagtataaggatcttcaggcaaagtatgaaaaagaaacttctgagatg
atcaccaaacatgatgcagacatcaaagggtttaagcagaacttgttggatgcagaagag
gcactgaaagctgcacaaaagaaaaatgatgagttggaaacacaggctgaggagctgaaa
aagcaagcagagcaggctaaagccgacaaaagagcagaagaagttttacagaccatggag
aaggtgaccaaagagaaggatgccattcaccaagaaaagattgaaactttggcatccttg
gagaactcgagacagacaaacgagaagctgcagaatgaattggacatgcttaaacaaaac
aacttgaaaaatgaagaggaactcactaaatcaaaggagcttctgaacctggagaacaag
aaagtggaagagcttaaaaaagaattcgaagcgctgaagctggcagctgctcagaagtcc
cagcagcttgcagctttgcaagaggagaacgtgaaacttgccgaggagctgggcagaagc
agggacgaagtcacaagtcatcagaagctggaagaggagagatcagtactcaataaccag
ttactagagatgaaaaagagagaatcaacattaaaaaaagaaattgatgaagagagagca
tctttacaaaaatccatcagtgatactagtgccttgatcacacagaaagatgaagaactg
gaaaaactcagaaatgagatcacagtgctccgtggagaaaatgcttctgcaaaaacctta
cagtcagtggttaagacattggagtctgataagttgaaacttgaggaaaaggtgaagaac
ttggagcaaaaactcaaggcaaaaagcgaacagccattaactgtaaccagcccctcaggt
gacatagctgctaatctacttcaagatgaaagtgcagaagataaacagcaagagattgac
ttcctgaactcagtgatagtagatctgcaaaggagaaatgaagaattaaacttgaaaata
cagagaatgtgtgaagcagccctcaatggcaatgaagaagagacaatcaactatgacagt
gaggaagaaggcctgtccaagaagacgcctcgcctcttctgtgacatctgcggctgcttt
gatctccacgacaccgaggactgcccgacccaggcgcagatgctggaggagcctccacac
tccacgtaccacggcagcaggcgggaggagcggccctactgtgacacctgcgagatgttt
gggcactggacagccgactgcaacgacgacgagaccttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (153)   
   KEGG ORTHOLOGY (1)   
   RefGene (147)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (64)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (62)   
DNA sequence (91)   
   RefSeq(nuc) (63)   
   GenBank (14)   
   EMBL (14)   
Protein domain (2)   
   Pfam (2)   
All databases (315)   

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