KEGG   Gallus gallus (chicken): 396143
Entry
396143            CDS       T01006                                 
Symbol
CNGA1
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha
  KO
K04948  cyclic nucleotide gated channel alpha 1
Organism
gga  Gallus gallus (chicken)
Pathway
gga04744  Phototransduction
Brite
KEGG Orthology (KO) [BR:gga00001]
 09150 Organismal Systems
  09157 Sensory system
   04744 Phototransduction
    396143 (CNGA1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:gga04040]
    396143 (CNGA1)
Ion channels [BR:gga04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   396143 (CNGA1)
SSDB
Motif
Pfam: Ion_trans CLZ cNMP_binding Ion_trans_2 CDC45 Connexin DUF2207_C NPR3 SlyX Tim54 Zip Menin RNA_pol_Rpc4 Sec62
Other DBs
NCBI-GeneID: 396143
NCBI-ProteinID: NP_990551
CGNC: 10542
Ensembl: ENSGALG00000014136
UniProt: Q90980
Position
4:66582511..66591134
AA seq 645 aa
MKVGVIETHHSHPIIPSVVVQDTSEDPGLIEKGENRFARQWYLPGAFAQYNINNNSNKDE
EKKKKKEKKSKSENKKDGERQKNKEKKEKHKNKDKKKGKEEEKKKDIFIIDPAGNMYYNW
LFCITMPVMYNWTMIIARACFDELQNDYLAVWFIVDYVSDVIYIADMFVRTRTGYLEQGL
LVKEEQKLKEKYKSSLQFKLDFLSIIPTDLLYFKLGLNYPELRINRLLRVARMFEFFQRT
ETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGADTWVYPNTSHPEFARLTRK
YVYSLYWSTLTLTTIGETPPPVRDSEYFFVVVDFLVGVLIFATIVGNVGSMISNMNAARA
EFQAKIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIAIN
VHLETLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICRKGDIGREMYIIKEGKLAVVA
DDGVTQFVVLSDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMEALTEY
PDAKAMLEEKGKQILMKDGLLDIEVANLGSDPKDLEEKVAYMEGSMDRLQTKFARLLAEY
DAAQQKLKKRLTQIEKILKPVMEQEFLDFEEADPPTDKPGVTKTE
NT seq 1938 nt   +upstreamnt  +downstreamnt
atgaaggtaggagtaattgagacccatcactcccatccaattattcccagcgtggtggtg
caagacaccagtgaggatcctggactgatagagaaaggggaaaacagatttgccaggcaa
tggtatctacctggtgcatttgcacagtacaatattaacaacaacagtaataaagatgaa
gagaaaaagaagaaaaaagaaaagaagagcaagtcagaaaataaaaaggatggagaaaga
caaaagaacaaggaaaaaaaggaaaaacacaaaaataaagacaagaagaaaggaaaggag
gaagagaagaagaaagatattttcatcattgatccagcaggaaatatgtattacaactgg
ttgttctgcatcacaatgcctgtcatgtacaactggactatgattattgctagagcctgt
tttgatgagcttcagaatgactacttagctgtatggtttattgttgattatgtttctgat
gtcatctatattgctgacatgtttgtacggacaagaacaggttacctggaacaaggtctt
ctagtgaaagaagaacaaaagcttaaagagaaatacaagagctccctacaattcaaatta
gattttctgtcaatcataccaactgacctcttatactttaagttaggactgaattacccg
gaattgagaataaaccgactgctccgagtagctcggatgtttgaatttttccagcgaaca
gaaacaagaacaaactacccaaatatcttcaggatctctaaccttgtcatgtacattgtg
attattattcactggaatgcctgtgtgtattactcaatctcaaaagcgattggatttggg
gctgacacgtgggtgtaccccaacacctcccatcctgagtttgcccgtctgaccagaaag
tacgtctatagcctctactggtccactctgaccctgactactattggtgaaacacctcct
cctgtacgagattctgagtatttctttgtggttgttgacttcttggttggagtgttgatt
tttgctaccatcgttggtaacgtcggctctatgatctccaacatgaatgctgccagggca
gagtttcaagccaagattgatgctatcaagcagtacatgcactttcggaatgtaagtaaa
gacatggaaaaaagagttataaagtggtttgactatctctggacaaacaaaaaggctgtg
gatgaaagggaagtcttgaagtatctgccagacaaactaagagcagagattgcaatcaac
gttcacctggaaacattaaaaaaagttcggatttttgcagactgtgaagctggtctgttg
gttgaacttgttttgaaactccagccacaagtgtacagtcctggagactatatttgcaga
aaaggagatattggacgagaaatgtacattatcaaagaaggcaaactcgcagtagtcgct
gatgatggagtgacacaatttgtggtcctaagtgatggcagctattttggagaaatcagc
attcttaatatcaaaggtagcaaagctggcaatcgaagaacggccaatattagaagtatt
ggatactcagacctgttctgtctgtctaaagatgatctcatggaggctttaacagagtat
cctgatgcaaaggcaatgctggaagagaaaggtaaacaaatcctcatgaaagatggattg
ctggatattgaagttgcaaatttaggaagtgatcctaaagacctggaagagaaggttgct
tatatggaaggatcaatggacaggttacaaacgaagtttgccaggttgttagctgagtat
gatgctgcacaacagaaactgaaaaaaagacttacacagattgagaaaatattgaagcca
gttatggagcaagaattcttagactttgaagaagcagatccacccacagataaacctgga
gtgacaaaaacagaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (14)   
   Pfam (14)   
All databases (37)   

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