KEGG   Gallus gallus (chicken): 396440
Entry
396440            CDS       T01006                                 
Symbol
TNC
Name
(RefSeq) tenascin precursor
  KO
K06252  tenascin
Organism
gga  Gallus gallus (chicken)
Pathway
gga04510  Focal adhesion
gga04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:gga00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    396440 (TNC)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    396440 (TNC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:gga00536]
    396440 (TNC)
Glycosaminoglycan binding proteins [BR:gga00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   396440 (TNC)
SSDB
Motif
Pfam: fn3 Fibrinogen_C EGF_2 EGF_Tenascin Pur_ac_phosph_N EGF NDNF hEGF DUF4998 Filamin Big_5
Other DBs
NCBI-GeneID: 396440
NCBI-ProteinID: NP_990787
CGNC: 49806
Ensembl: ENSGALG00000039990
Position
17:complement(3013995..3080707)
AA seq 1808 aa
MGLPSQVLACAILGLLYQHASGGLIKRIIRQKRETGLNVTLPEDNQPVVFNHVYNIKLPV
GSLCSVDLDTASGDADLKAEIEPVKNYEEHTVNEGNQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEGLVSSLREQCASGAGCCPNSQTAEGRLDTAPYCSGHGNYSTEICGCVCEP
GWKGPNCSEPACPRNCLNRGLCVRGKCICEEGFTGEDCSQAACPSDCNDQGKCVDGVCVC
FEGYTGPDCGEELCPHGCGIHGRCVGGRCVCHEGFTGEDCNEPLCPNNCHNRGRCVDNEC
VCDEGYTGEDCGELICPNDCFDRGRCINGTCFCEEGYTGEDCGELTCPNNCNGNGRCENG
LCVCHEGFVGDDCSQKRCPKDCNNRGRCVDGRCVCHEGYLGEDCGELRCPNDCHNRGRCV
NGQCVCDEGFIGEDCGELRCPNDCHNRGRCVNGQCECHEGFIGEDCGELRCPNDCNSHGR
CVNGQCVCDEGYTGEDCGELRCPNDCHNRGRCVEGRCVCDNGFMGEDCGELSCPNDCHQH
GRCVDGRCVCHEDFTGEDCRERSCPNDCNNVGRCVEGRCVCEEGYMGIDCSDVSPPTELT
VTNVTDKTVNLEWKHENLVNEYLVTYVPTSSGGLDLQFTVPGNQTSATIHELEPGVEYFI
RVFAILKNKKSIPVSARVATYLPAPEGLKFKSVRETSVQVEWDPLSISFDGWELVFRNMQ
KKDDNGDITSSLKRPETSYMQPGLAPGQQYNVSLHIVKNNTRGPGLSRVITTKLDAPSQI
EAKDVTDTTALITWSKPLAEIEGIELTYGPKDVPGDRTTIDLSEDENQYSIGNLRPHTEY
EVILISRRGDMESDPAKEVFVTDLDAPRNLKRVSQTDNSITLEWKNSHANIDNYRIKFAP
ISGGDHTELTVPKGNQATTRATLTGLRPGTEYGIGVTAVRQDRESAPATINAGTDLDNPK
DLEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSGKKNEVEIPVDSTSFILRGLDAGTEY
TISLVAEKGRHKSKPTTIKGSTEEEPELGNLSVSETGWDGFQLTWTAADGAYENFVIQVQ
QSDNPEETWNITVPGVQHSVNVTGLKANTPYNVTLYGVIRGYRTKPLYVETTTGAHPEVG
ELTVSDITPESFNLSWTTTSGDFDAFTIEIIDSNRLLEPMEFNISGNSRTAHISGLSPST
DFIVYLYGISHGFRTQAISAAATTEAEPEVDNLLVSDATPDGFRLSWTADDGVFDSFVLK
IRDTKRKSDPLELIVPGHERTHDITGLKEGTEYEIELYGVSSGRRSQPINSVATTVVGSP
KGISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGV
DYNVNIISVKGFEESEPISGILKTALDSPSGLVVMNITDSEALATWQPAIAAVDNYIVSY
SSEDEPEVTQMVSGNTVEYDLNGLRPATEYTLRVHAVKDAQKSETLSTQFTTGLDAPKDL
SATEVQSETAVITWRPPRAPVTDYLLTYESIDGRVKEVILDPETTSYTLTELSPSTQYTV
KLQALSRSMRSKMIQTVFTTTGLLYPYPKDCSQALLNGEVTSGLYTIYLNGDRTQPLQVF
CDMAEDGGGWIVFLRRQNGKEDFYRNWKNYVAGFGDPKDEFWIGLENLHKISSQGQYELR
VDLRDRGETAYAVYDKFSVGDAKTRYRLRVDGYSGTAGDSMTYHNGRSFSTFDKDNDSAI
TNCALSYKGAFWYKNCHRVNLMGRYGDNNHSQGVNWFHWKGHEYSIQFAEMKLRPSSFRN
LEGRRKRA
NT seq 5427 nt   +upstreamnt  +downstreamnt
atgggactcccttcccaggttttggcctgtgccatcttaggtttgctgtaccagcatgcc
agtggtgggctcatcaagcgaattatccggcagaagcgggagactgggctcaatgtgacc
ttaccagaggataatcagcctgtggttttcaatcatgtctacaacatcaagctgcctgtt
ggctccctttgctctgtggacctggacacagcaagtggggacgcagacctgaaggcagaa
attgagcctgtcaagaattacgaggagcatacggtgaatgaggggaaccagattgtcttc
acgcaccgcatcaacattccccgccgggcctgtggctgtgcggctgccccagacatcaag
gacctgctgagcagactggaggagctggaggggctggtatcctccctccgggagcagtgt
gccagcggggctggatgctgtcctaattcccagacagcagaaggtcgcctggacacggcc
ccctattgcagtgggcacggcaactacagcaccgagatctgtggctgcgtgtgcgagcca
ggctggaaaggccccaactgctccgaaccggcctgcccacgcaactgcctcaaccgcggc
ctctgcgtgcggggcaaatgcatctgcgaggagggctttaccggcgaggactgcagccag
gctgcctgcccgtctgactgcaacgaccaaggcaagtgtgtggatggggtgtgcgtctgc
ttcgagggctacacgggcccggactgcggcgaggagctctgcccccacgggtgtggcatt
cacgggcgctgtgtgggtggacgctgtgtgtgccacgagggcttcactggcgaggactgc
aatgagcctctgtgccccaacaactgtcacaaccgcgggcgctgtgtggacaacgagtgc
gtctgcgatgagggctacacgggagaggactgcggcgagctgatttgccccaatgactgc
tttgaccgcgggcgctgcatcaatgggacctgcttctgcgaggagggctacactggagag
gactgcggcgagctgacctgccccaacaactgcaacggcaacgggcgctgtgagaacggg
ctgtgtgtgtgccatgagggcttcgtgggggatgactgcagccagaagaggtgcccgaag
gactgcaataaccgcgggcgctgcgtggatgggcgctgtgtgtgccatgaggggtacctg
ggggaggactgtggggagctgcggtgccccaacgactgccacaaccgcgggcgctgcgtc
aacgggcagtgtgtgtgtgatgagggattcattggggaggactgtggagagctgcggtgc
cccaacgactgccacaaccgcgggcgctgcgtcaatgggcagtgcgagtgccacgaggga
ttcatcggggaggactgcggggagctgcggtgtcccaacgactgcaacagccatgggcgc
tgtgtcaatgggcagtgcgtgtgtgatgaggggtacacaggggaggactgcggggagttg
cggtgccccaacgactgccacaaccgcgggcgctgcgtggagggacgctgtgtgtgtgac
aacggcttcatgggggaggactgcggggagctgtcctgtcccaatgactgccaccagcac
gggcgctgcgtcgatgggcgctgcgtgtgccatgaggacttcactggggaagactgccgg
gaacggtcctgccccaatgactgcaacaacgtgggccgctgtgtcgagggacggtgtgtc
tgtgaggaaggttacatggggatcgactgttctgatgtgtctcctccaacagagctgact
gtaacgaatgtaacagataaaacggtaaatctggaatggaagcatgagaatctcgtcaat
gagtaccttgtcacctatgtccctaccagcagtggtggcttagatctacagttcaccgta
ccaggaaaccagacatctgccactattcatgagctggagcctggtgtggaatacttcatc
cgtgtctttgcaatccttaaaaacaagaaaagtattccagtcagtgccagagtagcgaca
tatttgcctgctccagaaggtctgaaattcaaatctgttagagaaacgtctgtccaggtg
gaatgggatcctctgagcatttcctttgatggctgggagctggtctttcgtaatatgcag
aaaaaggatgataatggagacataaccagcagcttgaaaaggccggagacatcatatatg
cagccaggattggcaccaggacaacagtataatgtatcccttcatatagtgaaaaacaat
accagaggaccagggctatcccgagtgataaccacaaaactcgatgcccctagccagatt
gaagcgaaagatgtcacagacaccacagctctgatcacatggtccaaacccttggctgaa
attgaaggcatagagctcacatatggccccaaggatgttccaggggacaggactaccatt
gacctctctgaggatgaaaaccaatattctattggaaacctgaggccacacacagaatat
gaagtgatactcatttctcggcgaggggacatggagagtgaccctgcaaaagaagtcttt
gtcacagacttggatgctccacgaaacctgaagcgagtgtcacagacagacaacagcatt
actttggagtggaagaacagccatgcaaatattgataattaccgaattaagtttgctccc
atttctggtggagaccacactgagctgacagtgccaaagggcaaccaagcaacaaccaga
gctacactcacaggtttgagacctggaactgaatatggcattggagtgacagcagtgaga
caggacagggaaagtgctcctgctaccattaatgctggcactgatcttgataaccccaag
gacttggaagtcagtgaccccactgaaaccaccctgtcccttcgctggagaagaccagtg
gccaaatttgatcgttaccgcctcacttacgttagcccctctggaaagaagaacgaagtg
gagatccctgtggacagtacctcttttatcctgagaggattagacgcagggacggagtac
accatcagtctagtggcagagaagggcagacacaaaagcaaacccacaaccatcaagggt
tcgactgaggaagaacctgagcttggaaacttatcagtgtcagagactggctgggatggt
ttccagctcacctggacagcagccgacggggcctatgagaactttgtcattcaggtgcag
cagtctgacaatccagaagaaacctggaacattacagtccccggcgtacagcactctgtg
aacgttacaggcctcaaggccaacacaccttataacgtcacactttatggtgtgattcga
ggctacagaaccaaacccctttatgttgaaaccacgacaggagcacaccctgaagttggt
gagctaaccgtttccgacattactcctgaaagcttcaacctttcttggacgaccaccagc
ggggactttgacgcctttactattgaaattattgattctaacaggttgctggagcccatg
gagttcaacatctcaggcaattcaagaacagctcatatctcagggctttcccccagcact
gattttattgtctacctctatgggatctctcatggtttccgcacacaggcaataagtgct
gcggctacaacagaggcagaacccgaggtggacaaccttctggtttcagatgctacccct
gacggcttccgtctgtcctggactgcagatgatggggttttcgacagttttgttctaaaa
atcagggataccaaaaggaaatctgatccactggaactcatagtaccaggccatgagcgc
acccatgatataacagggctgaaagagggcactgagtatgaaattgagctctatggagtt
agcagtggacggcgctcccaacccataaattcagtagcaaccacagttgtgggatctccc
aagggaatctctttctcggacatcacagaaaactctgctacagtcagctggacgcccccc
cgcagccgtgtggatagctacagggtctcctatgtccccatcacaggcggcactcccaat
gttgttacagttgatggaagcaagacaaggacaaagctggtgaagttagtcccaggtgta
gactacaacgttaatatcatctctgtgaaaggctttgaagaaagcgaacccatttctgga
attctgaaaacagctctggacagcccgtcaggactggtagtgatgaacattacagactcg
gaggctctggcaacctggcagcctgcaattgcagctgtggataattacattgtctcctac
tcttctgaggatgagccagaagttacacagatggtatcaggaaacacagtggagtacgac
ctgaatggccttcgacctgcgacagagtacaccctgagggtgcatgcagtgaaggatgcg
cagaagagcgagaccctctccacccagttcactacaggactcgatgctccaaaagattta
agtgctaccgaggttcagtcagaaacagctgtgataacgtggaggcctccacgtgctcct
gtcactgattacctcctgacctacgagtccattgatggcagagtcaaggaagtcatccta
gaccctgagacgacctcctacaccctgacagagctgagcccatccactcaatacacagtg
aaacttcaggcactgagcagatctatgaggagcaaaatgatccagactgttttcaccaca
actggtcttctttatccttatcctaaagactgctcccaagctctcctgaatggagaggtc
acctctgggctctacactatttatctgaatggagacaggacacagcctctgcaagtcttc
tgtgacatggctgaagatggaggtggatggattgtgttcctgaggcgtcaaaatggaaag
gaagatttctacaggaactggaagaattacgtggccggctttggagatcccaaggatgaa
ttctggataggtctggagaacctccacaaaatcagctctcaggggcagtacgagctgcgt
gtggatctgagagacagaggtgagacagcctatgctgtgtacgacaagttcagcgttgga
gatgccaagacccggtaccggctgagggtggatggctacagtggcacagcaggtgactcc
atgacctaccataatggaagatccttctccacttttgacaaggacaatgattctgctatc
accaactgtgctttgtcatacaagggtgctttctggtacaagaattgtcaccgagtcaat
ctgatgggcagatatggtgacaacaaccacagtcagggtgttaattggttccactggaag
ggccacgaatactccatccagtttgcagagatgaaactgagaccctccagctttcggaat
ctggaaggaagacgaaagcgagcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (136)   
   KEGG ORTHOLOGY (1)   
   RefGene (130)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (38)   
   RefSeq(pep) (38)   
DNA sequence (56)   
   RefSeq(nuc) (42)   
   GenBank (7)   
   EMBL (7)   
Protein domain (11)   
   Pfam (11)   
All databases (246)   

Download RDF
DBGET integrated database retrieval system