KEGG   Gallus gallus (chicken): 415957
Entry
415957            CDS       T01006                                 
Symbol
IARS
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X2
  KO
K01870  isoleucyl-tRNA synthetase [EC:6.1.1.5]
Organism
gga  Gallus gallus (chicken)
Pathway
gga00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    415957 (IARS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:gga01007]
    415957 (IARS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gga03016]
    415957 (IARS)
Enzymes [BR:gga01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.5  isoleucine---tRNA ligase
     415957 (IARS)
Amino acid related enzymes [BR:gga01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   415957 (IARS)
Transfer RNA biogenesis [BR:gga03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    415957 (IARS)
 Prokaryotic type
   Other AARSs
    415957 (IARS)
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 DUF5915 tRNA-synt_1g tRNA-synt_1e
Other DBs
NCBI-GeneID: 415957
NCBI-ProteinID: XP_015148966
CGNC: 3573
Ensembl: ENSGALG00000004813
Position
12:3912093..4002640
AA seq 1265 aa
MVQQVPENISFPNEEEKILELWKKLNCFQECLKQSKNRPRFNFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNNQC
RGIVMRYSKEWEFNVTRLGRWIDFENDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIVSFPLVEDASVSLVAWTTTPWTLPSNLALCVNP
ELQYVKLRDKATGKIYILMESRLIALYKSDSEYEILDRFPGIVLKGKKYKPLFEYFIQCK
DQGAFTVLVDSYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDVSGCFTA
EVTDFAGQYVKDADKNIIKLLKEKGRLVHSSSYKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVC
IGSMAELEELSGVKVTDLHRESIDHLTIPSRCGKGVLRRVPEVFDCWFESGSMPYAQVHY
PFENKKELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPMAIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAY
RFLVQNVHILQHKDEGREFLYNENTVKESNNIMDKWILSFTQSLIQFFKAEMAAYRLYTV
VPRLVKFVDILTNWYVRMNRRRLKGENGTEDCIMALETLFSVLFSMCRLMAPYTPFITEL
MYQNLKTLIDPASVQEKNTESIHYLMLPPVREDLIDRKIESAVSCLQSVIELGRVIRDRK
TIPVKYPLKEVVVIHQDPEALENIRSLEKYILEELNVRQVTLSTNKDKYGVRLRAEPDHM
VLGKRLKGAFKPVMAAIKELKSEQLEEFQETGTIVVEGHELHGEDLRLMYTFDQVAGGSA
QFEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRSHPEG
DYLDTVIKEHTDFIFATIKAALKPYPVPTSKEVLIQETTQLKGSELEITLVRGGLCERVG
PACSYVNLKVCVNGTEQDGVLLLENPKGDNTLNLTGLVDAVSCIFGLKNSKLTVFNGKTE
LINKTDLLSLSGKTLHVTTGSAPALINSPDALLCQYINLQLVNAKPQECQKGTVGTLLME
NPVGQNGLTYHGLLHETAKVFGLRSRRLKLFLDEAETQEITKDISMKNLNMKTVYVSVIP
TTAEC
NT seq 3798 nt   +upstreamnt  +downstreamnt
atggttcaacaagttccagaaaacataagttttccaaatgaggaagagaagatactggag
ctctggaagaagcttaattgtttccaggaatgcctaaagcagtcaaagaatagacctagg
tttaacttctatgatggccctccatttgctaccgggcttccgcactatggccatattctt
gcaggaaccattaaagacatagttaccagatttgctcaccagagcggttttcatgttgac
agaagatttggatgggattgccatggcctacctgtggaatatgagattgacaagacctta
ggcatcaaagggccagaggatgtggcaaagatggggattgcagaatacaacaaccagtgc
agaggaattgtgatgagatactcaaaggaatgggagttcaacgttaccagattaggacgc
tggattgattttgaaaatgactataaaacactttatcctgaattcatggagtctgtatgg
tgggttttcaagcagctttatgacaagggactggtatacagaggtgttaaagtcatgcct
ttttctactgcttgcaataccccattgtcaaattttgagtcccatcagaattacaaggat
gttcaagacccttcggtgattgtgagtttcccactggttgaagatgcaagtgtctctctt
gttgcttggaccactacaccttggactttacctagcaatctggccctttgtgttaaccca
gaactacaatatgtgaaattgagagataaggctacaggaaagatttacatcttgatggag
tccaggctgatagcactatacaaatctgacagtgaatatgagatactggacaggtttcct
ggcattgttctgaaaggcaagaagtataaaccactctttgagtattttattcagtgcaaa
gatcaaggtgcctttactgtgctagtagacagttatgtgaaggaggaagaaggcacaggt
gttgttcatcaagccccctattttggtgctgacgattacagagtctgtatggattttaat
attattcagaaagattctgtcccagtttgtcctgttgatgtatcaggctgcttcacagct
gaagtgaccgactttgctgggcagtatgtgaaggatgcagataagaacatcattaaatta
ctgaaggagaagggcagactggttcacagcagtagttacaaacatagctatccgttctgc
tggaggtcagatactccgttgatatacaaagctgtgccaagctggtttgtaagagtagag
catatggtggagaagctactggagaataatgcacagtgctactgggttccggattttgtg
agggagaagcgttttgggaactggctaaaagatgcacgagattgggctatatctcgaaac
cgatactggggaacacccatcccactgtgggtcagtgatgattttgaagaggtagtttgt
attggttcaatggcggaactggaagagctgtcaggagtgaaagtcactgatctccatcgg
gaaagtattgatcatctaaccatcccttcacgctgcggcaaaggcgttttgcgccgggtc
cctgaagtttttgattgctggtttgagagtggaagcatgccttatgcacaagtgcattat
ccgtttgaaaacaaaaaagaacttgaagatgcttttccagctgacttcattgctgaaggc
attgaccaaacccgaggatggttctacactttgctggtgctgtccactgctctttttgga
agacctcctttcaagaatgtaattgtaaatggcctagttcttgccagtgatggacaaaaa
atgagcaaaaggaagaagaattatcctgatccaatggctattgtaaatagttatggagct
gatgcactaaggttataccttatcaattctccagtggtaagagcggaaaacttgagattc
aaggaggaaggagtaagggacatactgaaggatgtcttcctgccctggtacaatgcatat
cgctttctagttcagaacgttcacatcctgcaacacaaggatgagggaagagaattcctt
tacaatgagaacacagttaaggagagcaataacatcatggataaatggattctttctttc
acccaatcgctcattcagttcttcaaagctgaaatggcagcttacaggctgtacacggta
gtccctcggttagtgaagtttgtagacattctgaccaactggtatgtgagaatgaatcgc
agaagactgaagggcgagaatgggactgaggactgcattatggccctggaaaccttgttc
agtgttttgttttccatgtgcagacttatggctccgtatactccatttatcactgaactg
atgtaccagaatctgaagacgcttattgatccagcctcagttcaggagaagaatactgaa
agcattcactacctcatgcttcccccagtgagggaggatctgatcgacagaaaaattgaa
agtgctgtttcttgtttgcagtctgttattgagcttggacgagtaatcagagacagaaaa
accattccagtaaagtatcctttgaaagaagtagttgttatccatcaagacccagaggct
ctggaaaacatcaggtctctagagaagtacatacttgaggagctgaacgtacgccaggtg
acgttatccacgaataaagataaatatggagtcaggctgagagcagaaccggatcacatg
gtgcttgggaagcgtttgaaaggtgcatttaagcctgtcatggctgcaatcaaagagctg
aagagtgagcagctggaggaattccaagagacaggcaccattgttgtagaaggacacgag
ctccatggggaggatcttcgtctcatgtatacttttgatcaggttgcaggaggatctgct
cagtttgaggcacattctgatgctcaggttttagttctgctggatgttaccccagaccag
tctatggtggatgaaggagtggcccgggaagtgatcaaccgcattcagaagcttcgcaaa
aagcgaaatctagttcccacagatgagattacagtgtactacagatcacatccagaaggt
gattacttggatactgtcattaaggagcatacagatttcatttttgcaacaataaaggct
gccctgaagccttacccggttcctacctcaaaagaagttctcatccaggagaccactcag
ctgaagggatcggagctagaaattacacttgtcagaggtggtttgtgtgagcgtgttggt
ccagcctgttcctacgtcaacctcaaagtctgtgttaatgggacagaacaagatggtgtg
ttgctgctggagaatccaaaaggagataatacgttgaacctcactggacttgtcgatgca
gtctcctgcatttttggacttaaaaattcaaaactgacagtttttaatggaaaaacagaa
ctgataaacaaaactgacttgcttagtctcagtggaaagactctgcatgtgacaacgggg
tcagcacctgctctcatcaactctcctgatgctcttctctgccagtatatcaacttgcag
ttagtaaatgcaaaaccacaagagtgtcagaaaggaacagtgggaactcttctaatggaa
aaccccgttggtcagaatggattaacataccacggtcttctacatgaaacagcaaaagtt
tttgggctcagaagcaggaggctaaaattgttcctggatgaagcagagactcaggagatc
acaaaggacatctccatgaagaacctgaacatgaagaccgtatatgtcagtgttataccc
accacagctgaatgttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (16)   
   RefSeq(nuc) (10)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (69)   

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