KEGG   Gallus gallus (chicken): 416119
Entry
416119            CDS       T01006                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
gga  Gallus gallus (chicken)
Pathway
gga03013  Nucleocytoplasmic transport
gga04141  Protein processing in endoplasmic reticulum
gga04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    416119 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    416119 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    416119 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gga03019]
    416119 (SEC13)
   04131 Membrane trafficking [BR:gga04131]
    416119 (SEC13)
Messenger RNA biogenesis [BR:gga03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     416119 (SEC13)
Membrane trafficking [BR:gga04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    416119 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    416119 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    416119 (SEC13)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 416119
NCBI-ProteinID: NP_001264770
CGNC: 6381
Ensembl: ENSGALG00000008419
UniProt: A0A1D5NYF8
Position
12:complement(19853537..19860212)
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIK
RFASGGCDNLVKIWKEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF
IWTCDDASGSSWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGLWACIS
DVNKGQGGVSAVPEGQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttccgtcattaacaccgtggacacctctcacgaggacatgatacacgatgcgcag
atggattactatggcactcggctagcgacctgttcttcagacagatctgtgaaaatcttt
gatgttcggaatggagggcagatcctcattgcggacctaagagggcatgaaggtccagtg
tggcaagttgcctgggctcatcctatgtacggaaacatcttggcttcctgctcctatgac
aggaaggttattatctggaaggaagaaaatggcacttgggaaaagacctatgagtacaca
gggcatgattcctcagtgaattctgtctgctgggcaccacacgactacggactgatactg
gcctgcgggagctctgatggtgcaatttcattactgagctacactggtgacgggcagtgg
gaagtcaaaaagatcagcaatgcacatactattggatgtaatgcagttagctgggctcct
gctgttgtaccaggcagccttatagagcaaccatctggtcaaaaaccaaactacatcaaa
agatttgcatctggtggttgtgacaaccttgtcaagatctggaaagaagaagatggtcag
tggaaagaagagcagaagctggaggcacacagtgactgggttcgagatgtagcctgggct
ccatccataggcttgccaacaagtaccattgctagctgttcacaggatggcagagtgttt
atctggacatgcgatgatgcctctggaagttcatggtcaccaaaattgctgcacaagttc
aatgatgttgtctggcatgtgagttggtccattactgcaaatatacttgcagtgtctgga
ggagacaataaagtcacactgtggaaggaatcggtagatgggctgtgggcatgcatcagc
gatgtcaacaagggccaaggaggagtgtctgccgttccagaagggcagcagaatgagcag
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (15)   
   RefSeq(nuc) (3)   
   GenBank (6)   
   EMBL (6)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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