KEGG   Gallus gallus (chicken): 416909
Entry
416909            CDS       T01006                                 
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
  KO
K13103  tuftelin-interacting protein 11
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gga03041]
    416909 (TFIP11)
Spliceosome [BR:gga03041]
 Complex C
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-SnRNP related factors
    416909 (TFIP11)
  Other components
   Complex C specific factors
    416909 (TFIP11)
SSDB
Motif
Pfam: GCFC TIP_N G-patch G-patch_2 Sec3_CC
Other DBs
NCBI-GeneID: 416909
NCBI-ProteinID: NP_001025836
CGNC: 4187
Ensembl: ENSGALG00000005623
UniProt: Q5ZII9
Position
15:complement(7446501..7454301)
AA seq 827 aa
MSMSHLYGTDGEDGVEMENFEVSDWDLQNEFNPHRHRHRQTKEEATYGVWAERDSDEERP
SFGGKRSRDYSAPVNFISAGLKKSAAEDVSDEDSDEDEKPVKQEEIPKEFVPKKLKTGGN
FKPSQKGFVGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR
KGKGAVGAYGSERTSQSLQDFPVVDSEEEAEEEFQKELSQWRKDPNGGKKKPKYSYKTVE
ELKAKGRINKQLSTPQKELSQVKVIDMTGREQKVYYSYSQISHKHNIPDDNPQQLLGKDS
KPQGFALPELEHNLQLLIDITEQEIIQSDRQLQYERDMVVNLTHEIQKMSEILSHEETAI
SNLSKVLDMVEECERRMQPSCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYP
LMKDYFKNWDPLKDCTYGTEIIAKWKSLLENDQLLSHGGQDLSTDAFHRLMWEIWMPYVR
NIVAQWQPRNCGSMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHS
WIHPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVK
NIVPKLGMCLNELIINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWL
SNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGAREN
IAYLTHTERRKDFQYEAMQERREAENMAQRGIGMAASSVPMNFKDLIQTKAEEHNIVFMP
VIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq 2484 nt   +upstreamnt  +downstreamnt
atgtcgatgtcgcacctgtacggcacggacggggaggatggcgtggagatggagaacttt
gaggtgtcggactgggaccttcagaacgagttcaaccctcatcggcatcggcaccggcag
accaaggaggaggccacttacggcgtgtgggccgagcgcgactcagacgaggagcggccc
agcttcggcggcaagcgctctagggattactcagcccccgtgaacttcatcagtgcaggg
ctgaaaaagtcagcggctgaggatgtgtcagatgaggactctgacgaagatgagaagccc
gttaagcaggaggagatccctaaagagtttgtgccaaagaagttgaaaactggtggaaat
ttcaagcccagtcagaagggctttgtagggggcacaaaatctttcatggattttggcagc
tgggagagacacactaagggaattgggcagaaacttctccagaagatgggttatgtccct
ggaagaggtcttggaaagaatgctcaaggtattattaatccaattgaggccaagcaaaga
aaaggcaaaggagctgtgggagcatatggctctgaaagaaccagccagtctttgcaagac
ttccctgttgttgactcggaagaagaagctgaagaggaatttcaaaaagaactcagtcag
tggcggaaggatcctaatggaggcaagaaaaagcccaaatacagctataagacagtagaa
gaactgaaagccaagggtaggattaacaaacagctttcaacccctcagaaggagctctct
caagtcaaggttatagatatgacgggccgggagcaaaaggtttattacagctacagtcaa
attagccacaagcacaatatccctgatgacaatcctcagcagctgctgggcaaagactct
aagccccagggattcgccctgcctgagctggagcacaacttacagcttctcattgacatc
acggagcaggagatcatccagagtgaccgccagctgcagtatgagagagacatggtagtc
aacctgacccatgagatacagaagatgtctgaaattctctcgcatgaggagacagcaatt
agcaatctcagcaaagtcctggacatggtggaagagtgtgagagacggatgcagcccagc
tgtgaaaatcctttgaccttggatgagtgtgcaaagatttttgagacacttcaagacaag
tactacgaagagtacagaatgtctgatagggtagacttggcagtagcaatagtctatcct
ctcatgaaagattacttcaagaactgggatcccctcaaggactgtacatatggcacagag
attatagccaagtggaagagccttttggaaaacgaccagctgttatcacacggtgggcag
gacctatcaacagatgcttttcacagactgatgtgggaaatctggatgccatatgtcaga
aacatagtggcacagtggcagccaaggaactgtggatcgatggtggatttcctggatagt
tgggtacacatcattcctgtgtggatactggataacattctggatcagcttatcttcccc
aagctacagaaagaggttgaaaactggaatcctttgactgacacagtcccaatccattcc
tggatccatccctggcttcccctgatgcaggcacgattggaaccactttattctcccatc
agaaacaagctggcaaacgctctgcagaaatggcatcccagtgactcctcagccaaactt
atccttcagccctggaaggatgtgttcacacccgggtcatgggaggctttcatggtcaaa
aacattgtgcctaaactcgggatgtgtttgaacgaactcataataaaccctcatcagcag
cacatggatgccttctactgggtgattgactgggagggaatgatttctgtctccagtctt
gttgggctgctggagaaacacttcttcccaaaatggctgcaggtgctatgctcttggctc
agcaatagccccaattacgaagagatcacaaagtggtacttgggctggaagtccatgttc
tcagaccaagtgttggcacatccgtcgatcaaagacaaatttaatgaagctcttgatatc
atgaaccgggctgtctcttccagtgttggtggctacatgcagccaggtgcccgggagaac
attgcataccttactcacacagagaggaggaaagacttccagtacgaagccatgcaggag
aggcgagaggccgagaacatggctcagcgaggcataggcatggctgccagctctgtgcca
atgaattttaaggacctgattcagacaaaagcagaggaacacaacatcgttttcatgcct
gtgatcgggaagcgacacgaagggaaacagttgtatacgtttggacggattgtgatttac
attgacagaggtgttgtatttgtacaaggagaaaagacctgggtgccaacctctctccag
agtctcattgatatggccaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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