KEGG   Gallus gallus (chicken): 418378
Entry
418378            CDS       T01006                                 
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain precursor
  KO
K23455  collagen type VIII alpha
Organism
gga  Gallus gallus (chicken)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 418378
NCBI-ProteinID: NP_001280063
CGNC: 11352
Ensembl: ENSGALG00000015253
Position
1:complement(85381328..85470456)
AA seq 739 aa
MAVLLIPTQLLAVAVAVSLPLVRSTQGGVYYGIKQLPPQVPQYQALGQQVPHMPLGKEGI
PMQHMGKEVPHMQYGKEYPHLPQYMKEVPQVPMLGKDMAPKKEKEIPMRSLRGEQGPPGE
PGPRGPPGPPGLPGHGVPGAKGKPGPQGYPGIGKPGLPGMPGKPGVMGPPGPRGEMGPKG
EVGPMGIPGPQGPPGPHGLPGIGKAGAPGLQGQPGPKGEPGMKGPPGVPGIPGPKGEKGV
GIPGLPGLKGPPGLPGPPGPVGLPGVGKPGMVGFPGPQGPVGKPGPPGELGLQGPPGVPG
MQGPPGLPGVGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGVGKPGFPGPKGERGVG
GLPGPLGPKGEKGHAGPPGMGGPPGEPGQPGLPGIMGPPGAVGFPGPKGEGGAVGPPGPV
GPKGEPGLQGFPGKPGFPGEVGAPGLRGLPGPTGPKGEAGHKGLPGLPGVPGLVGPKGEP
GLPGAQGLQGPSGIPGIAGPSGPIGPPGLPGAKGEPGQPGPPGFPGVGKPGAAGLQGPPG
KPGALGPPGQPGLQGPPGPPGPPGPPVIIPPTPPAAGQYLPEVGPGIDGLKPPYGYAGKK
GKAGGAVYEMPAFTAELLTPFPRVGVPVKFDKLLYNGRQNYNPATGIFTCEIPGIYYFAY
HVHCKGASVWVALFKNNEPLMYTYDEYKKGFLDQASGSAVVQLMPGDKVYVQMPSEQAAG
LYAGQYVHSSFSGYLLYPM
NT seq 2220 nt   +upstreamnt  +downstreamnt
atggccgtgctgctcattcccacacagctgttggcagtggctgttgccgtttccctgccg
ctggtgaggtccactcagggtggtgtctactatggaatcaagcagctgccaccccaggtg
ccccagtaccaagccctcggacaacaagtacctcacatgccgctgggcaaggaaggcatc
ccgatgcagcacatgggcaaggaggtgccacacatgcagtatggcaaagagtacccccac
ctgcctcagtacatgaaggaggttccccaggtgccaatgctcggcaaggacatggctccc
aagaaggaaaaagaaatacccatgcgcagcttgaggggcgagcaaggtccccctggtgag
cctggaccaagaggaccaccagggccaccaggattaccaggtcatggcgtgccaggagcc
aaaggaaaaccgggtccacaaggatatccaggaattgggaagccgggtttgccagggatg
cctgggaaaccaggggtgatgggaccacctgggccaagaggagagatggggccgaaagga
gaggttgggcccatggggataccggggccacagggaccaccaggacctcatggactccca
gggatagggaaagcgggtgctccggggctgcagggacagccaggaccaaagggtgaacct
gggatgaaagggcccccaggggtccctgggatccctggtccaaaaggtgagaagggtgtt
gggatcccgggtttgccagggctgaagggcccacctgggctgcccggtccccccggccct
gtgggtctgccaggggtggggaagccaggtatggtggggttccctggccctcagggccct
gtgggtaaacctggtcccccaggtgagctagggctgcaggggcctccgggtgtccctggg
atgcaaggacctcccggcctgcctggcgttggcaaacccggccaagatggcatccctggt
cagccaggtttcccaggtggcaaaggggagcaaggcttgccaggcttgccaggccctcct
ggtctccccggggttggtaagccaggcttccccggccccaaaggtgagcgtggggtaggt
ggcctgcctggtcctctggggcccaagggggagaaaggccatgcagggccaccaggcatg
ggggggccaccaggggagccaggacaaccaggcctgccgggcatcatgggccccccaggt
gccgtcggtttcccaggacccaaaggagaaggcggcgctgtggggccaccaggaccagtg
ggccccaaaggcgaaccaggcctgcaggggttcccagggaagccaggctttcccggggaa
gtgggagcacccgggctgagggggctgccaggccccactgggcccaagggagaagcagga
cacaagggcttgccggggctgccgggtgtcccggggcttgtggggccgaagggtgagccg
gggctgcctggtgcgcagggccttcagggcccctcgggtatcccaggcattgcagggccc
agtggccctattggccccccagggctgccaggggccaagggggaacctggccaacccggt
cctcctggctttcctggcgtgggaaaacctggggctgcagggctgcagggccctccaggg
aagcctggggcacttggtccccctggccagccaggcctccaggggcctcccggtccccct
gggccacctggacccccagtaatcatccccccgactccaccggctgcgggacagtacctg
cccgaggtggggccagggatagatggcctcaagcccccctacggctatgcaggcaagaag
ggcaaggccggcggcgctgtctacgagatgcctgcattcacggcagagctcctcactccc
ttcccccgggtcggtgtgcccgtgaagtttgacaagctcctctacaacggccggcagaac
tacaaccctgcaacagggatcttcacctgtgagatccctgggatctactactttgcctac
cacgttcactgtaaaggtgcgagcgtctgggtggctttgttcaagaacaacgagccactg
atgtacacctacgatgagtacaagaagggcttcctggaccaagcctctgggagtgctgtc
gttcagctgatgcccggagacaaggtttacgttcaaatgccatccgagcaggcagcagga
ctctatgccgggcaatacgttcactcatctttttcaggatatttattgtatcccatgtag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (11)   
   RefSeq(nuc) (7)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (39)   

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