KEGG   Gallus gallus (chicken): 418556
Entry
418556            CDS       T01006                                 
Symbol
KDM6A
Name
(RefSeq) lysine-specific demethylase 6A isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gga03036]
    418556 (KDM6A)
Enzymes [BR:gga01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     418556 (KDM6A)
Chromosome and associated proteins [BR:gga03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     418556 (KDM6A)
   Histone demethylases
    418556 (KDM6A)
SSDB
Motif
Pfam: KDM6_C-hel JmjC KDM6_GATAL TPR_1 TPR_2 TPR_16 TPR_17 TPR_8 TPR_12 TPR_19 TPR_9 TPR_7 TPR_11 ANAPC3 SNAP
Other DBs
NCBI-GeneID: 418556
NCBI-ProteinID: XP_015156114
CGNC: 50790
Ensembl: ENSGALG00000016217
Position
1:complement(112146806..112296773)
AA seq 1484 aa
MKSCGVSLAAAAASAAPFGDEEKKMAAGKASGQSEEDFASLTAEEREALSGLDSRLFGFL
RLHEDGARTKALLLKAVRCYESLILKAEGKVESDFFCQLGHFNLLLEDYPKALSAYQRYY
SLQSDYWKNAAFLYGLGLVYFHYNAFQWAIKAFQEALYVDPSFCRAKEIHLRLGLMFKVN
TDYESSLKHFQLALIDCNPCTLSNAEIQFHIAHLYEIQLSTFHEHQLKTFSTNFPLFHLK
RKYHSAKEAYEQLLQIENLPAQVKATVLQQLGWMHHTVDQLGDKATKESYAIQYLQKSLE
ADPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDAL
QAYICAVQLDHGHAAAWMDLGTLYESCNQPQDAIKCYLNATRSKNCSNTSALAARIKYLQ
AQLCNLPQGSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQACKPHHPNTEPVLGL
TQTPISQQSLPLHMIPSSQVDDLTSPAKRKRTSSPTKNTSDVWSSGHTVSHPPVQQQIHS
WCLTPQKLQHLEQLRANRNNLNPAQKLMLEQLESQFVLMQQHQQMRQTGVAQVRSTGIPN
GPTADSSLPTNSVSGQQPQVALTRVPNVAQRGIRPACPGQPMANGPFPAGPIPCSTARTL
SSTDTILIGNNHITESGSNGNVPYLQQNALSLPHNRTNLTSSAEEPWKNQLSNSTQGLHK
GQSSHLAGPNGERPLSSTGPSQHLQASGTGIQNQNGHPATPSNSVTQGAALNHLSSHTAT
SGGQQGITLTKESKPSGNTSAVPETSRHSGETPNSTAGVEGLPNHVHQVTADAVSSPSHG
DSKSPGLLSSDNPQLSALLMGKANNNVGTGTCDKVNNIHPAVHTKTENSIASSPSSAIST
ATPSPKSTEPTTTNSVTSLNSPHSGHTVNGEGLEDSQSPVKADPPPISHKPSPQIIPSMS
VSIYPSSAEVLKACRNLGKNGLSNSSILLDKCPPPRPPPPPYPPLPKDKLNPPTPSIYLE
NKRDAFFPPLHQFCTNPNNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHVVEVRTQLLQ
PADENWDPTGTKKIWRCESSRSHTTIAKYAQYQASSFQESLREENEKKSHHKDHSDNEST
SSDNSGRRRRGPFKTIKFGTNIDLSDDKKWKLQLHELTKLPAFVRVVSAGNLLSHVGHTI
LGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPESYWGVMNDFCEKNNM
NFLMGSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLTA
CQYKLAVERYEWNKLQSVKSIVPMVHLSWNMARNIKVSDPKLFEMIKYCLLRTLKQCQTL
REALIAAGKEIVWHGRAKDEPAHYCSICEVEVFDLLFVTSESNSRKTYVVHCQDCARKIS
TNLENFVVLEQYKMEDLMQVYDQFTLRSPGDHNWIRWRWEESGQ
NT seq 4455 nt   +upstreamnt  +downstreamnt
atgaaatcgtgcggagtgtcgctcgccgccgccgccgcctctgctgctcctttcggtgat
gaggaaaagaaaatggcggcggggaaagcgagcggccagagcgaggaggacttcgccagc
ttgacagccgaggagagagaagccctatccggcctcgacagccgactcttcggatttctg
aggcttcatgaagatggcgccagaacgaaggccttgctgttaaaggctgttcgctgctat
gaatcgctaattttgaaagctgaaggaaaggtcgagtctgatttcttttgtcagttaggt
cacttcaacctcttattggaagattatccaaaagcattatctgcataccagaggtactac
agtttacaatctgactactggaagaatgctgcctttttatatggccttggtttggtctac
ttccattacaatgcctttcaatgggcaattaaagcatttcaggaggcgctttatgttgat
cccagcttttgtcgagccaaggaaattcatttgcgacttggacttatgttcaaagtgaac
acagactatgagtccagtttaaagcattttcagttagctttgattgactgcaacccctgc
actttgtctaacgctgaaattcagtttcacatcgcccacttatatgaaatccagttgtct
acatttcatgaacaccaattaaaaaccttttctaccaacttccctttgttccatttgaaa
agaaagtatcactctgcaaaggaagcttatgaacaacttttgcagatcgaaaaccttcct
gcacaagtaaaagcaactgtcttacagcagttaggctggatgcatcacaccgtggatcag
cttggagacaaggcaaccaaggaaagttatgctatacagtatctccagaaatctctagaa
gcagatccaaattctggtcaatcctggtatttccttggaaggtgctattcaagtattggg
aaagttcaggatgcctttatatcttataggcaatctattgataaatcagaagcgagtgca
gatacatggtgttctataggtgtgctgtaccaacagcaaaatcagcctatggatgcttta
caggcctatatctgtgctgtacaattagaccatggccatgctgcagcctggatggaccta
ggcacactctatgagtcctgcaaccagcctcaggatgccattaaatgctacttaaatgca
actaggagcaaaaattgtagtaatacctctgcacttgcagcacggataaagtatttacag
gctcagttgtgtaaccttccacaaggtagtctacagaataaaactaaattacttcctagt
attgaggaggcatggagcctaccaatccccgcagagcttacctccaggcagggtgccatg
aacacagcacagcaggcttgtaaacctcatcatccaaatactgaacctgtactaggcctc
actcaaacaccaatttcacagcaatccttgccactacacatgattccttctagccaagta
gatgacctgaccagtcctgccaagaggaaaagaacatctagtccaacaaagaatacttca
gatgtttggagcagtggccatacagtgtcacatcctcctgtacaacaacaaattcattct
tggtgcttgacaccacagaaattacagcacttggaacagctacgtgcaaaccgaaataat
ttaaatccagcacagaaacttatgctggagcagctggagagtcagtttgtcttgatgcag
caacaccagcaaatgagacaaacaggagttgcacaggtacgatctactggaattcctaat
gggccaacagctgattcatcactgcctacaaactctgtctctggtcagcagccacaggtt
gctctaaccagagtgcctaatgtcgctcagcgtggaatccgtccggcctgccctgggcag
cctatggctaatggaccctttccagcaggccccattccctgcagcacagcaagaacgctg
agtagtacagacactattttgataggcaataatcacataacagaaagtggaagtaatgga
aacgtgccttacctgcagcaaaacgcactctctctacctcataaccgcacaaacctgacc
agcagcgcagaggagccgtggaaaaaccaactatctaactccactcaggggcttcacaaa
ggtcagagttcacatttggcaggtcctaatggtgaacgacctctctcttccactgggcct
tcccagcatctccaggcatctggcactggtattcagaatcagaatggacatcctgccacg
cctagcaattcagtaacacagggggctgctctcaatcacctctcctctcacactgctacc
tcaggtggacaacaaggcattaccttaaccaaagagagcaagccttcaggaaacacatca
gcagtgcctgaaacaagcaggcattctggagagacacctaacagcactgccggtgtagag
ggacttcctaatcatgtccatcaggtgacggcagatgctgtttctagccctagccatgga
gattctaagtcaccaggtttacttagttcagacaatcctcagctctctgccttgttgatg
ggaaaagccaataacaatgtgggtactggaacctgtgacaaagtcaataacattcatcca
gctgttcatacaaagactgagaattctattgcctcctcaccatcttcagccatttccaca
gcaacaccttctccaaaatctactgaaccgactaccacaaacagtgttaccagccttaac
agccctcacagtggacatacagttaacggagaggggttggaggactctcagagccctgtg
aaagcagatcctcctccgattagccacaaacctagtcctcagatcataccatcaatgtcg
gtgtccatataccccagctcagcagaagttctaaaggcgtgtcggaatctgggtaaaaat
ggcttatctaacagtagtattctattggataaatgcccacctccacgaccaccgcctcca
ccataccctcccttgccaaaggacaagctgaatccacctacacctagtatttatttggaa
aataaacgagatgctttctttccacctttacatcaattttgtacaaatccaaacaaccct
gttactgtaatacgtggccttgctggagcgcttaaattagatctaggactcttctctacc
aagacattggtagaagcaaataacgaacacgtagtagaagtgaggacacaactactgcag
ccagcagatgaaaactgggaccccactggaacaaagaaaatctggcgttgtgaaagcagt
agatctcatacaacaattgctaaatatgcacagtaccaggcctcctcattccaggagtct
ttaagggaggaaaacgaaaaaaagagtcaccacaaggaccactcagataatgaatccaca
tcttcagataattctgggaggaggagaagaggaccttttaaaacaatcaagtttgggacc
aacattgacctgtcagatgacaaaaagtggaagttgcaactccatgaactgacaaaactt
cctgcttttgtacgtgtggtatcagcaggaaatcttctaagccatgttggtcataccatc
ctgggcatgaacacagtgcagttgtacatgaaggttccaggaagcagaacaccaggtcat
caagaaaacaacaacttctgttcagtaaatataaatattggtccaggtgactgtgaatgg
tttgttgtccctgaaagctattggggtgtcatgaatgacttttgtgaaaagaacaatatg
aatttcctaatgggatcttggtggccaaacttggaggatttgtatgaagccaatgtccca
gtttatcgatttattcaaagaccaggggatttggtatggataaatgctggcactgttcat
tgggttcaggctatcggctggtgcaacaacattgcttggaatgttggccctcttacagcc
tgtcaatacaaattggcagtggaacggtacgaatggaataaactgcagagcgtgaagtcc
atagtacccatggttcatctttcatggaatatggctcgaaatatcaaggtctcagatcca
aagctttttgaaatgatcaagtattgcttgttaagaactctcaaacagtgtcagacactg
agggaagctctgattgctgcaggaaaagagattgtctggcatgggcgagcaaaggatgag
ccagctcattactgtagcatttgtgaggtggaagtctttgatctgctttttgtcactagt
gagagcaattctcgaaagacctatgttgtacattgccaagactgtgcacgaaagataagc
acgaacctggaaaattttgtggtgctagaacagtacaaaatggaggacttgatgcaagtc
tatgatcaatttacattaagatcacctggagaccataactggatcagatggagatgggaa
gaatcaggacagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (32)   
   RefSeq(pep) (32)   
DNA sequence (40)   
   RefSeq(nuc) (32)   
   GenBank (4)   
   EMBL (4)   
Protein domain (15)   
   Pfam (15)   
All databases (119)   

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