KEGG   Gallus gallus (chicken): 419238
Entry
419238            CDS       T01006                                 
Symbol
YTHDF1
Name
(RefSeq) YTH domain-containing family protein 1
  KO
K20102  YTH domain-containing family protein
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gga03019]
    419238 (YTHDF1)
Messenger RNA biogenesis [BR:gga03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     419238 (YTHDF1)
SSDB
Motif
Pfam: YTH
Other DBs
NCBI-GeneID: 419238
NCBI-ProteinID: NP_001012851
CGNC: 4283
Ensembl: ENSGALG00000005745
UniProt: Q5ZME7 Q5F3J9
Position
20:complement(8701741..8714334)
AA seq 561 aa
MSATSVDPQRPKGQDNKVQNGSLHQKDTVHDNDFEPYLSGQSNQNSSYPSMTDPYLSSYY
PPSIGFPYSLSEAPWSTGGDPPIPYLTTYGQLSNGDHHFMHDAVFGQPGGLGNNIYQHRF
NFFPENPAFSAWGTSGSQGQQTQSSAYGSSYSYPPSSLGGTIVDGQTGFHNDTLNKAPGI
NSIEQGMVGLKIGGDVTTSAVKTVGSVVNSAGMTGALSGNGGSNVNLPVSKPTSWAAIAS
KPAKPQPKMKTKTGPVIGGALPPPPIKHNMDIGTWDNKGPVAKVPAPQQIPSPQSVPQPQ
QQIVQPVPAQPPPLTQPQYQSPQQPPQNRWIAPRNRNAAFGQSGGTGNDSNSAGSTQPNP
VPSGESHPVLEKLKAAHSYNPKDFEWNLKNGRVFIIKSYSEDDIHRSIKYTIWCSTEHGN
KRLDSAFRSMNSKGPVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVKW
IFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVHLEKAKQVLKIIATYKHTTSIFDDFSH
YEKRQEEEEVVRKERQNRNKQ
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgtctgccacaagcgttgaccctcagagaccgaaaggacaggataataaagtacaaaat
ggttcgttacatcaaaaggatacagttcacgacaacgattttgaaccttacctttctggg
cagtcaaatcagaacagtagctatccatcaatgactgatccttatctgtcaagttattat
ccaccatctattgggtttccctactctctcagtgaagcgccatggtctacaggaggagat
cctcctatcccgtatctcaccacctatggacagctcagtaatggagatcatcattttatg
catgatgctgtttttggacagcctgggggtctgggaaataatatctatcaacaccggttt
aactttttccctgaaaatcctgccttctcagcttggggaacaagtggatcccaaggacag
cagactcaaagttcagcatatgggagcagttacagctatccacctagttcactgggaggt
accatcgtggatggacaaacaggatttcataatgatacattaaataaagctcctggaata
aacagtattgaacagggaatggtcggacttaagattggtggagatgttacaacttcagct
gtgaaaacagtaggttctgttgttaacagtgctgggatgacaggtgccctctctggtaat
ggtggatcaaatgtaaacttgccagtatctaaaccaacttcttgggctgctatagctagc
aaacctgcaaaaccacagcctaaaatgaaaacaaaaactggacctgtgattggaggagca
ttgccgcctcctcctataaagcataatatggacataggtacttgggacaataagggtcct
gtggcgaaagttcctgctccccagcagataccttctcctcagtctgttccacagccacag
caacaaattgttcagcctgttccagctcagcctcctccattgactcaaccacagtatcag
agccctcaacagccaccccaaaatcgctggattgctcctcgcaacagaaatgcagctttt
ggccaaagtggaggaactggtaatgacagcaattcagctggcagtacccagcctaaccct
gttccaagtggtgagtcccatcctgttcttgaaaaactgaaagctgctcacagctataat
cctaaagattttgaatggaaccttaaaaatggacgtgtgttcataataaagagctattct
gaggatgatattcatcgttccattaagtatactatttggtgtagtacggagcatggcaac
aaacgcctggacagtgcttttcggtccatgaatagcaagggtccggtctacttgctattc
agtgtcaatggcagtggacacttctgtggagttgcagagatgaaatcacctgtggactat
ggcaccagtgcaggtgtctggtctcaggacaagtggaaggggaaatttgatgtcaagtgg
atctttgtgaaggatgtgcccaacaaccagctccgacacatcaggctggagaacaatgac
aacaaacctgttacaaactcccgtgacacacaggaggtgcacttagaaaaagcaaaacaa
gtgcttaaaattattgctacttacaagcacacgacctccatctttgatgacttttctcat
tatgaaaagcgccaagaagaggaggaggtggtgcggaaggaacgtcagaatcgaaacaaa
caataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (19)   
   RefSeq(nuc) (5)   
   GenBank (7)   
   EMBL (7)   
Protein domain (1)   
   Pfam (1)   
All databases (40)   

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