KEGG   Gallus gallus (chicken): 420004
Entry
420004            CDS       T01006                                 
Symbol
MED1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
  KO
K15144  mediator of RNA polymerase II transcription subunit 1
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gga03021]
    420004 (MED1)
Transcription machinery [BR:gga03021]
 Eukaryotic type
  RNA polymerase II system
   Mediator complex
    Middle
     420004 (MED1)
SSDB
Motif
Pfam: Med1
Other DBs
NCBI-GeneID: 420004
NCBI-ProteinID: XP_418125
CGNC: 51147
Ensembl: ENSGALG00000001708
UniProt: E1BUI5
Position
27:complement(6950981..6964618)
AA seq 1583 aa
MKAVPGGAEEAEKLNKMSTLLERLHAKYNQNRPWTETMKLVRQVMEKRVVMNSGGHQHLV
SCLETLQKALKVSSLPAMTDRLESIARQNGLGSHLSANGTECYITSDMFYVEVQLDPTGL
LCDVKVAHHGENPVSCPELVQHLREKNFDEFSKHLRGLVNLYKLPGDNKLKTKMYLALQS
LELDLSKMAGMYWQATNANPLDKILHGSVGYLTPRSGGLLMNLKYYVSPYDLFEDGTGAP
VILHESNVPRSLGMNVSVTIEGTMAMYKLPIAPLIMGSHPVDSKGTPSFSSITSANSVDL
PACFFLKFPRPIPVSRAFIQKLQGCTGIPLFDTAPTFVPLYELITQFELSKEADPIPLNH
NMRFYAALPGQQHCYFLNKDAPLPDGRSLQGTLISKIAFQHPGRVPIILNLIRHQVAYNT
LIGSCVKRTVLKEDSPGILQFEVCPLSDSCFSVSFQHPVNDSLVCVVMDVQDSTHVNCKL
YKGLSDALICTDDFIAKVVQRCMSIPVTMRAIRRKAETIQADTPALSLIAETVEDMVKKN
LPPASSPGYGMTTGSNPMSGTTTPTNTFPGGPITTLFNMSISMKERHDSVGHGEDFSKVS
QNPILTSLLQITGNVGSAIGSSPTPPHHTPPPLSSPAGNTKNHPMLMNLLKENPPQDFST
LYGSSPLERQNSSSGSPRMEMGPGGSKQKKKKSRMPADKPKHQTEDDFQRELFSMDVDSQ
NPIFDVNMTADTLDTPHITPAPSQCSTPPTTYPQPIPHSQPSIQRMVRLSSSDSIGADVT
DILSDIAEEASKLPATNEDCPPIGTPVRDSSSSGHSQSALFDPDVFQTNNSENPYTDPAD
LIADAAVSPNSDSSNHFFPDGVDFNPDLLNSQSQSGFAEEYFDESSQSGDTDDFKGYASQ
ALSTLGVQVLGGDGGDNKFKGSNPSDTVDFSIIAAASKALGSSDIMEHHSGGQSPLLNTG
DLGKEKSQKRVKEGNGSGSNMAGSGIDGKPGKRSRTPSSDGKSKEKLPKRKKQETDGKSP
SHSSSNRPFTPPASTGGSKSPGSSGRSQTPPGVATPPIPKITIQIPKGTVTVGKPSSHGQ
YTSSGSVTSSSSKSHHSHSSSSSSSSSSSTSGKIKSSKSEGSSGSKMSSSLYSSQGGSSS
GPSKSSAQSVGKPGSSPITKHGLSSGSGSTKMKPQGKPSSLMNPSMSKPNISPSHSRPSG
GSDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTGSSSSMKSSSGMGSSGSMSQKPP
PSSNSSTASSSSFSSSGSSMSSSQNQHGSSKGKSPSRNKKPSLTAVIDKLKHGVVTSGPG
GDDPMDGQMGPSSNSSSHTMSSKHNMSGGEFQGKREKSDKEKSKVSVSGGSVDSSKKTSD
SKNVGSTGVAKIIISKHDGGSPSIKAKVTLQKPGEGGGDSLRPQMASSKSYGSPLISGST
PKHERCSPSHSKSPAYTPQNIDSESESGSSIAEKSYQNSPSSDDGIRPLPEYSSEKHKKH
KKEKKKVKDKDRDRDRDRDKDRDKKKSHSMKPESWSKSPISADQSLSMASSAILSAERPS
RPSPEFLIGEEDDDLMDVALIGN
NT seq 4752 nt   +upstreamnt  +downstreamnt
atgaaggcggtgccgggaggcgctgaggaggcagagaagctgaataagatgagtactctc
ttagaaagacttcacgcaaagtacaaccaaaacagaccttggacagaaaccatgaagctg
gttcgtcaagtcatggaaaaacgagttgtgatgaactctggggggcaccaacatctggtg
agctgtttggagaccttgcaaaaagcattaaaagtgtcatctctgcctgccatgacagat
cgcttggagtctatagccagacaaaatggccttggatctcaccttagtgcaaatggcact
gaatgttacatcacttcagacatgttctatgtggaagtccagttagatcctacagggctg
ctctgtgatgtcaaggtggctcaccatggagaaaatcctgtgagctgtccagaattggtg
caacatctgagagagaaaaattttgacgaattttctaagcatttaagggggcttgtgaac
ctgtataagctgccaggagacaacaaactcaaaactaaaatgtacctggctcttcagtcc
ttggagctggatctctcaaaaatggcagggatgtattggcaggctaccaatgcaaaccca
ctggacaagattcttcatggcagtgttggctatctcaccccgaggagcggaggtctcctt
atgaatctcaagtattatgtctcgccctacgatttatttgaagatggcactggagcccct
gttattttgcatgagagcaatgttcctcgatctttgggtatgaatgtgtcagtgacaatt
gagggaaccatggcgatgtacaaacttcccattgcaccgctgataatgggttctcatcca
gtggacagcaaaggaactccatctttctcatcaatcacaagtgccaacagcgtggactta
ccagcttgcttcttcttgaaattcccgcgccccattccagtgtctcgagctttcattcag
aaactccagggctgcacaggtattccattgtttgacacagcgccaacgtttgtacccttg
tatgagttgattacacagtttgaattatctaaggaggctgatcccatccctttaaaccac
aatatgcgcttctatgcagctcttccaggacagcagcactgttactttctgaacaaggat
gctcctctcccagatggaagaagccttcaaggaacactgattagcaaaatcgccttccag
cacccaggacgggttcctattatcctcaatttgatcaggcaccaagtggcatacaacaca
ctgattggcagctgtgtcaagcgaacagttttaaaagaagattctcctgggatcctgcag
tttgaagtttgtcctctgtcggactcctgttttagtgtatcctttcagcatcctgtgaat
gactccctggtgtgtgtggtaatggatgtgcaagactctactcatgtgaactgtaagcta
tacaaagggctatctgatgctctgatctgtacagatgatttcattgccaaagttgttcaa
agatgtatgtccattcctgtgaccatgagagcaattcgtagaaaagcagaaacgattcaa
gcagatacaccagccttgtccctcattgcagagacagtagaagatatggtgaagaaaaac
cttcccccagccagcagcccagggtatggcatgaccacaggcagcaacccaatgagtggt
accactaccccaaccaacacttttcctggggggcccatcactactttgtttaacatgagc
ataagcatgaaagagaggcatgactcggtgggccacggggaggacttcagcaaagtgtct
cagaacccaattctcactagtttgttacagatcacagggaatgtggggtctgccattggc
tcaagtcctacccctccccatcacacaccaccaccattatcctcaccagcaggcaacacc
aagaaccaccccatgctcatgaaccttcttaaagagaatcctcctcaggatttctccact
ctgtatgggagcagccctcttgaaaggcagaactcttcctctggctctcccagaatggaa
atgggtcctggggggagtaagcaaaagaaaaaaaaatcccgcatgcctgccgacaagccc
aagcatcagactgaggatgatttccagagggagctcttctcaatggatgttgactcccag
aatcccatttttgatgtcaacatgactgcagataccctggacacccctcatattactcca
gcacccagtcaatgcagcactcctcctactacttacccacagcctatacctcactcgcag
cccagtattcagagaatggttcgactttctagttcggacagcattggagccgatgttact
gatatcctttcagatatagcagaggaggcttccaagctacctgccactaacgaggactgt
ccacccattggcactcccgtaagagactcttctagttcaggacattcacaaagtgccctc
tttgacccagatgtttttcagacgaacaatagcgagaacccgtacacagatccagcagac
ctgatagcagatgctgctgtgagtcccaacagtgattcttcaaaccatttttttccagat
ggggtagatttcaatcctgacttgctaaacagtcagagccaaagtggttttgcggaggag
tactttgatgagagtagtcagagcggggacacggatgatttcaagggctatgcatcccag
gctctgagtactttgggagtacaagtgttggggggcgacgggggggataataaatttaag
gggagcaatccttccgatacagtagattttagcattattgcagctgcaagcaaagcactg
gggtcctctgacatcatggagcatcacagtggaggtcagagccccttactgaatacgggg
gatttagggaaagaaaagtctcagaaacgggtaaaagaaggcaatggttcaggaagtaac
atggcaggttctggaatagatgggaagccagggaagcgcagccggacaccctccagtgac
ggcaaaagtaaagagaaacttccaaagcggaagaagcaggagacagatgggaagtctcca
tcccacagttcgtccaacaggcctttcacaccgccagcaagcacaggtgggtccaaatct
cctgggagttcaggcagatctcagactcctcccggtgtagctactcctcctattccaaaa
atcacaatccagatcccaaaaggaactgtgactgttggcaaaccgtcttctcacggccag
tatacaagtagtggctctgtcacctcctccagcagcaaaagccatcatagccattcttcc
tcctcctcctcttcttcctcttcttcaacctcaggcaaaattaaaagcagcaaatcagaa
ggatcttctggctcaaagatgagcagcagcctctactcaagccagggtggctcaagttca
ggtccgtccaaaagctcagctcagtcagtgggaaaacccggatcctcccccatcaccaaa
cacggcctcagcagcggttctggaagtaccaagatgaaacctcaaggaaagccatcatcg
cttatgaacccttccatgagtaaaccaaacatctctccgtctcattctagaccctcagga
ggttctgacaagcttgcttctcccatgaaacctgttccaggtactcctccatcatctaaa
gcaaagtcacctatcagttcaggttctggaggctctcatatgtctgggaccgggtcaagc
tcaagtatgaaatcatcttcaggaatgggatcctctgggtctatgtcacagaagccacct
ccgtcatcaaattcttccacggcatcttcatcttccttttcatccagtgggtcttccatg
tcttcatctcaaaatcagcatggaagttccaaaggcaagtctcctagcagaaataagaag
ccatctctgactgcagtcatagacaaactgaaacatggggttgtcactagcgggcctggt
ggagatgacccaatggatggacaaatggggccaagttccaattcctcaagccatactatg
tcctccaaacacaatatgtctgggggtgagttccagggcaaacgagagaagagcgacaaa
gagaaatctaaagtctctgtttctggaggatccgttgactcttccaagaagacttcagat
tccaaaaacgttggaagcactggagtggccaaaattatcattagcaagcatgatggtggt
tcccctagtattaaagccaaagtaactttgcagaaacctggggaaggaggtggggatagc
ttaaggcctcagatggcttcttccaaaagctatggatcccctttgatcagtggatctact
ccaaaacacgaacgctgctctcccagccacagtaagtcaccagcatacactccccaaaac
atagacagcgagagtgagtcgggctcttccatagcagagaagtcctatcagaacagcccc
agctctgatgatggcatcaggccgttgcctgaatacagctcggaaaaacataagaagcac
aaaaaagagaagaaaaaagtgaaagacaaagaccgggacagagatcgggatcgggataaa
gacagagacaagaagaaatctcacagcatgaagccagagagctggtctaaatcccccatt
tcagctgaccagtccctctccatggcaagcagtgctatcctttcggcagagcggccgtcc
cggcctagccctgagtttctgattggggaagaagatgatgatctgatggatgtggctcta
attggcaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

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