KEGG   Gallus gallus (chicken): 420803
Entry
420803            CDS       T01006                                 
Symbol
COL15A1
Name
(RefSeq) collagen alpha-1(XV) chain isoform X1
  KO
K08135  collagen type XV alpha
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:gga00535]
    420803 (COL15A1)
Proteoglycans [BR:gga00535]
 Extracellular matrix (ECM) proteoglycans
  Basement membrane proteoglycans
   420803 (COL15A1)
SSDB
Motif
Pfam: Endostatin Collagen Collagen_trimer Laminin_G_3 3keto-disac_hyd Laminin_G_2
Other DBs
NCBI-GeneID: 420803
NCBI-ProteinID: XP_004935134
CGNC: 9574
Ensembl: ENSGALG00000034119
Position
2:55818594..55928518
AA seq 1134 aa
MLSCRAWWTWDVLLLFLGLSIHACSAAQVIEERGSKEHLDLTELIGVPLPPSVYFVTGYG
GFPAYSFGTDANIGRLTSAIIPLPFYRDFAIVVTVKPNSDRGGVLFAITDAFQKTIYLGI
RLSPVDESTQRIIMYYTEPGSSISREAASFKVPVMTNRWNRFTVTVQGNNIALFMDCEEY
QRVQFQRSDRALVFESGSGIFVGNAGATGLEKFTGSIQHLTIRADPRATEDHCEDDEPDA
SGDISGNGSVQEYEGIPETQEELVPSHLLVRPEDSLAEAVEAPPTILSYLEENDFSGHHR
AEETSEPAKIKEQDSVIVETGQSNRESTALMQKILREEDSSGASVSLGVSREIRLKPEEL
GSGYADREIEILKGSPGLHGHPGKPAPDSDVGLPESPGEDGSAGELGPERPPGLPGLDGV
VGPPGQKGEKGDRGLPGSVGAKGDTGVTGPIGPKGEAGADGAPGKPGPPGPPGPPGPPGP
TGVSYSLGFERSPSTKGQPGITGHPGGVGPKGEKGDPGPQGEPGKNGNDIVGPPGPPGPP
GPIIAIPELFLNDTKGILNFTAIEKLFGPPGPDGKPGLPGFPGPRGPKGDIGLPGLKGLK
GQQGEKGESGAVIAADGSLTELLGRKGQKGEAGVVGPMGPMGPIGPAGPKGELGFPGRPG
RPGLNGLKGVKGERGEALNGIPGLPGPPGPPGPPGHIVHIKGAVFPVSPRPHCKNTVTNT
YPGNQKVLNVHGAKGNGDCWSLSNSVDLKGEKGNRGAPGPPGPPLPPSYFSHFINTMKGE
KGDNGVKGEKGEPNGGFYLTGPPGPPGRPGLVGPKGDSVVGPRGPPGLPGLPGLPGYGKI
GPPGPPGPPGPPAIYGSAATMPGPPGPPGEPGSPVTRNLVTTFQNIEGMLEKVHLVTEGT
LIYLRETSDVFIRVQNGWRKLQLSELIPVPDESLPPPAVSSYGFQSLPVLNPISNVNNGK
PALHLVALNLPFSGDMRADFHCFQQSQQAGLMTTYRAFLSSHLQDLVTVVRKTDRYNLPI
VNLKGETLFNNWESIFDGNGGQFNIHVPIYSFDGRNVMTDPFWPQKIIWHGSTTNGIRLV
SNYCEAWHTADLAAMGQASPLNTGKLLDQKTYSCNNRFIVLCIENSFVSDPQGK
NT seq 3405 nt   +upstreamnt  +downstreamnt
atgctgtcatgtcgtgcctggtggacctgggatgtgctactactgttcttaggcctgtcg
atccatgcttgttcagcagctcaggtcatagaagaacgaggctcaaaagaacatcttgat
ctcacagagttaataggagttccactccctccttctgtctactttgtcactggctacgga
ggttttccagcgtatagctttggtacagatgccaacattggtcgattgacaagtgctata
ataccattgcctttctatagagattttgcaattgtagttacagtgaaaccaaacagtgat
cgtggaggagtgctatttgcaataacagatgccttccagaaaactatttacttgggaatt
agactttcaccagttgatgagagcacccagagaataattatgtattatactgaacctggc
tctagtatctcccgagaagcggcttcatttaaagtgccagtgatgactaataggtggaat
agatttacagtgactgttcagggaaataacattgctttgttcatggactgtgaagagtat
cagagagttcagtttcagaggtcggatcgagccttggtatttgaatctggctctgggata
tttgttggtaatgcaggagccacaggactggaaaagttcacaggctcaattcaacatctg
acaatcagagctgacccaagagctactgaagatcattgtgaagatgatgaaccagatgct
tcaggggacatcagtggcaatggcagtgttcaagaatatgaaggcattcctgagacacaa
gaagaacttgtgccttctcaccttctcgtaaggcctgaagattcattggctgaggcagtg
gaagcacctccaaccatattatcttatttggaagaaaacgatttctcaggacatcacaga
gcagaagaaacctctgaaccagctaaaatcaaagaacaagactcagttattgtggaaact
ggacaaagcaacagagaatctacagctctcatgcagaaaatcctaagagaagaagacagc
tctggtgctagtgtctcgctaggagtgagcagagagattagactgaaacctgaagaactg
ggttctggatatgctgatagagaaattgagattttaaaaggcagcccaggattgcatggc
catccaggaaaaccagcccctgattcagatgtaggacttcctgaatcaccaggggaagat
ggatctgctggtgaactgggccctgaacgtccgccaggtcttcctggtcttgatggtgtg
gttggcccaccaggacagaagggagaaaagggtgatagaggtcttcctggttctgttggt
gcaaagggtgatactggagtcactggaccaataggccctaaaggagaagctggcgctgat
ggtgctcccgggaaacctggaccgcctgggccccctgggccccctggacctcctggaccc
acgggtgtaagctacagtttaggatttgagagaagcccaagtacaaaaggacaacctggc
atcactggacatcctggaggtgtgggtccaaaaggggagaagggtgacccaggacctcag
ggtgaaccaggaaagaatggcaacgatattgtgggtccacctggaccaccaggaccacca
ggaccaatcatagccataccagagctatttctcaatgatacaaaaggaattcttaacttc
actgcaattgaaaaactgtttgggcctcctggaccagatggtaagccaggtttaccagga
tttcctggcccgcggggaccaaagggtgatattggcttgcctggattgaaaggactcaaa
ggacagcagggtgaaaaaggagaatctggagctgtcattgctgctgatggatctttaact
gaattgttaggaagaaaagggcagaagggtgaagctggagtggtaggaccaatgggacca
atgggaccaataggacctgctggacctaaaggagaacttggtttcccaggacgcccaggc
cgcccaggactgaatgggctgaaaggtgtgaaaggtgaacgaggtgaagcattaaacggc
attcctggtttgcctgggccccctgggccccctggacctccaggacatatagttcacatc
aaaggagcagttttcccagtctctcctagacctcattgcaagaatacagtgaccaatact
taccctgggaatcaaaaagttcttaatgtccatggtgctaaaggaaatggagattgctgg
agtctgagcaattcagtggacttaaaaggagaaaagggaaacagaggtgctccaggaccc
ccaggtccacctctgcctccatcatatttcagccattttattaataccatgaagggtgaa
aaaggagacaatggtgtaaaaggagaaaaaggagaaccaaatggaggtttttacctgaca
ggaccacctggaccacctggaagaccaggattagttggacctaaaggggattcagttgtt
ggacccaggggacctccagggttgcctggcttacctggtttaccaggttatggaaaaatt
ggaccacctggcccaccaggcccaccaggaccccctgcaatatatggatcagcagccaca
atgcctggaccaccaggtcctcctggagaaccagggtcacctgtaaccaggaatctggtt
acaacatttcaaaacattgaaggcatgttggaaaaggttcatttggtaacagaaggtaca
ctaatctatcttagagaaaccagcgatgtttttatccgtgttcaaaatggatggagaaaa
ttgcagctaagtgagctaattcctgtccctgacgagagccttccccctccagctgtatct
agttatggatttcaatctcttccggtactgaatccaatatcaaacgtgaacaatggaaaa
ccagcactgcacctggtggctttaaacttaccgttttctggtgacatgagagcagatttt
cactgtttccaacagtcccagcaagcaggtttgatgactacctatagggcctttctctca
tcacatttgcaagatctggtcacggttgtcagaaaaacggaccgatacaatttgccaata
gtaaatcttaagggagaaacacttttcaacaactgggaatctatatttgatggaaatggt
ggacaattcaacattcatgttccaatatactcttttgatgggagaaatgtcatgacagat
ccattctggcctcaaaaaataatatggcatggttcaactacaaatgggatccgactggtc
agcaactactgtgaagcctggcacacagctgatttggcagctatgggacaagcatcacca
ctgaacacgggaaaacttcttgatcagaaaacatatagctgtaataatcggtttattgtt
ctctgtattgaaaacagttttgtatctgatccccagggaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (6)   
   Pfam (6)   
All databases (62)   

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