KEGG   Gallus gallus (chicken): 420839
Entry
420839            CDS       T01006                                 
Symbol
JARID2
Name
(RefSeq) protein Jumonji
  KO
K11478  protein Jumonji
Organism
gga  Gallus gallus (chicken)
Pathway
gga03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    420839 (JARID2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gga03036]
    420839 (JARID2)
Chromosome and associated proteins [BR:gga03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    420839 (JARID2)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.2
     420839 (JARID2)
SSDB
Motif
Pfam: JmjC ARID JmjN zf-C5HC2
Other DBs
NCBI-GeneID: 420839
NCBI-ProteinID: NP_001012880
CGNC: 9637
Ensembl: ENSGALG00000012702
UniProt: Q5F363
Position
2:61065775..61271218
AA seq 1233 aa
MSKERPKRNIIQKEYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHGDGISGSLKAVN
GLLTNGQSKGLESEQLENEKDDASQVSSTSNDISSSDFEEGPSRKRPRLQAQRKFAQSQP
NSPSTTPIKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPSNMVYFGSSQDD
EDEEEEEEETEDTKTATNNASSSCQSTPRKGKTHKQVPNGQVFNGSSKSLKEKEPAQKHK
SKEATPGKEKNSEHKAESRKDQAAANHHPTTNTGSSTKGLTANNHHTLHRSAQDLRKQVS
KVNGITRMSSPSANAASAKKMRDVRPSPSKTVKYTATVTKGTVTYTKAKKELVKETKLNH
HKPSSPVNHTISGKLESSNAKTRKQVLSLGASKSNNTAVNGVKVNGKLNQKTCTKEVGRQ
LREGLRNSKRRLEETNHIDKIQSPTKRMKGAVNLAEAASKKAVVEKPLLNGHLKKEVPEK
NLERNRPKRATAGKSTPGKQAHGKTENASCENRSTSQAESLHKPQDSMGKHEKGSSKSGW
GMLGEIPILRPSTKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLNDEMRFVTQI
QHIHKLGRRWGPNVQRLACIKKHLKSQGITMDELPLIGGCELDLACFVQLINEMGGMQQV
TDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHKKLEKEVLLEKEILE
KRKGPLEGHSENAYKFHSLPRFEPKNGLINGVVHKNGFRNKLKEVDVPLKTGRRRLFAQE
KETTKDDEEEEEEGVLSDLHKCIYKGRSVSLTTFYRTARNIMNMCFTKEPTVAEVEQEYW
RLVEQKDSHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSILRHLGAVPG
VTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAAEENKLDDVVHTLLQAN
GTPGLEMLESNVMISPEILCKEGIRVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHF
ATTQWTSMGFKTAKEMKRRRIAKPFSMEKLLYQIATAEAKKENGPTLSTISSLLGELRDT
ELRQRRQLYEAGLHSSARYGSHDSSSTAMDGKKKPRKWLQLETSERRCQICQHLCYLSMV
VQENENVVFCLECALRHVEKQKSCRGLKMMYRYDEEQIISLVNQICGKVSGKNGSIENCI
SKPTPKRGPRKRATVDVPSSRLSSSSSSKSASS
NT seq 3702 nt   +upstreamnt  +downstreamnt
atgagcaaagaaagacccaagaggaatataattcaaaaggaatacgatgacagcgatggg
attccctggtcagaggagagggtggtgcggaaggtcctttatttatctctgaaggagttc
aagaacgcacagaagcggcaacatggtgatggcattagtggaagcctgaaggcagtgaac
ggacttctcactaatggccaatctaaaggattagagtcagagcagctggagaatgaaaag
gacgatgcatcgcaggtgtcctcaacgagcaacgatattagttcttcagattttgaagaa
gggccctcgaggaaaaggccaaggctgcaagcacaaaggaagtttgctcagtcccagcca
aacagtcccagcacaactccaataaagatagtggagccgttgttaccccctcccgccact
cagatttctgacctctccaaaaggaagcccaagacagaagattttcttactttcctctgt
cttcgaggttctccagccctgcccagcaacatggtatattttggaagctctcaggatgat
gaggatgaagaagaggaagaggaggagacagaggacacaaaaacagccacaaacaatgct
tcatcatcatgccagtcaacccccaggaaaggaaagacgcataaacaagttccaaatggg
caagttttcaatggatccagcaaatcattgaaggagaaagaacctgcccagaaacacaaa
agcaaagaggccacaccagggaaggagaagaacagcgaacataaggctgagagtcgaaaa
gaccaggctgctgctaatcaccatcctactacaaacactggctcctctacgaaagggctc
actgctaacaaccaccacactcttcatagatcggctcaggacttaagaaaacaggtttct
aaagtcaacggaatcactcgaatgtcatctccgagtgcaaatgcagccagtgccaaaaag
atgagagacgtcagaccttcaccgtccaaaactgtgaagtatactgcaacggtgacaaag
ggaactgtcacatacaccaaagccaagaaagaactggtcaaggaaaccaaactaaatcac
cacaaacccagttcacctgtcaaccacacaatctcagggaaactagaaagtagcaatgca
aaaacccgcaaacaggtgctatcccttggagcatccaagtctaacaataccgctgttaat
ggtgtaaaagtcaatggcaagttgaaccaaaagacatgcactaaggaggtggggagacag
ttgagggaggggctgcgcaattcgaagaggaggctggaagagactaatcacatagacaaa
atacagtcgcccaccaagaggatgaaaggggccgtcaacttggcagaagctgcgagcaaa
aaggcagttgtcgaaaagcctttgctgaatggacaccttaaaaaggaagtgccagagaag
aatttggaaagaaataggccgaaaagagccactgctggaaagagtacgccagggaaacaa
gcacatggcaaaactgaaaatgcctcctgtgaaaatcgttctacctctcaagcggagtcc
ttgcacaagccacaagactcaatgggaaagcacgaaaagggcagtagtaagtctgggtgg
gggatgctgggggagattcccatccttaggccctccaccaaggaatttcatgacccactg
atatacattgagtcagtccgagctcaggtagagaagtatgggatgtgcagggtgattcct
cctccagactggagacctgagtgcaagctaaacgatgaaatgcggtttgtgacacagatt
cagcacatacacaagctaggcaggcgctggggacccaacgtgcagcggctggcctgtatc
aagaagcacctcaaatctcagggcattaccatggacgaactcccactcataggaggctgt
gagctcgatctggcctgcttcgtccagctgatcaacgagatgggggggatgcagcaagtg
actgacctcaagaaatggaacaaactggcagacatgctgcgcatccccaaaactgcacag
gacaggctggccaagctgcaggaagcctactgccagtacttgctctcctatgactccctc
tcccctgaggagcacaagaaactggagaaggaggtcttgctggaaaaagaaatcttggag
aagaggaaaggacctttggagggacattcggagaatgcctacaagttccattccttgccc
cggtttgagcccaaaaacggactcatcaacggcgtggttcacaaaaatggcttccgcaac
aagttaaaagaggtcgacgtcccactgaagacgggcaggcggcggctcttcgctcaggaa
aaggagaccacaaaggatgacgaggaggaagaggaggagggagttcttagtgacttacac
aagtgtatatacaagggtaggtctgtttctttaacaaccttctaccgaacagcaagaaac
atcatgaacatgtgcttcacgaaggagcctacagtagctgaagtagagcaagaatattgg
cggttagtggaacagaaagatagccatgtagcagtgcattgtggaaaagtagataccaac
acccatgggagcggctttcctgtggggaaatctgaaccattttctaggcatgggtggaac
ctcacagtccttcctaataatacaggatccatcctgcgacatcttggtgctgtgcctgga
gtgacaattccttggctaaatattggcatggtcttttctacctcatgctggtctcgagac
caaaatcaccttccatacattgactacttacacactggtgctgattgcatttggtattgc
attcctgctgcggaggagaacaaacttgatgatgtggtacataccctgctgcaagccaat
ggcactccagggctggaaatgcttgaaagtaatgtaatgatctccccagaaatcttgtgt
aaggaggggatcagggtgcaccgtactgtacagcagagcgggcagtttgttgtctgtttt
cctggatcctttgtgtctaaagtgtgttgtggctatagtgtttctgaaacagtgcacttt
gctaccacccagtggacaagtatgggttttaaaacagccaaggaaatgaagaggcgacgt
atagccaaaccattttcaatggaaaagttgctttatcagattgcaacagcagaagcaaaa
aaggaaaatggaccgactctgagtacgatatcatcacttcttggggagctcagggacacg
gagctgaggcagcggcggcagctttacgaggcaggtctccactcctcggcgcgctatggc
agccacgacagcagcagcacggcgatggatggaaagaaaaagcctcgaaagtggttgcag
ttagaaacgtcagagaggagatgtcagatttgtcagcacctgtgctatctgtccatggtt
gtacaggagaacgaaaatgttgtcttctgcttggagtgtgccctgcggcatgtggagaaa
cagaagtcttgtcggggattgaaaatgatgtaccgctatgatgaggaacaaataatcagt
ctggtcaatcaaatctgtggaaaagtatctggtaaaaatggcagcattgagaactgtatc
agcaagcccacaccaaaaagaggacctcggaagagagcgacagtcgacgtgccatcatcc
aggctttcatcctccagttcatccaaaagtgcttcaagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (23)   
   RefSeq(nuc) (7)   
   GenBank (8)   
   EMBL (8)   
Protein domain (4)   
   Pfam (4)   
All databases (60)   

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