KEGG   Gallus gallus (chicken): 421950
Entry
421950            CDS       T01006                                 
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6
  KO
K22804  structural maintenance of chromosomes protein 6
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gga03400]
    421950 (SMC6)
DNA repair and recombination proteins [BR:gga03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     421950 (SMC6)
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_21 AAA_29 VP9 GAS Crescentin ABC_tran
Other DBs
NCBI-GeneID: 421950
NCBI-ProteinID: NP_001308543
CGNC: 12329
Ensembl: ENSGALG00000016467
UniProt: E1BWW3
Position
3:complement(100135690..100170162)
AA seq 1096 aa
MGKRKEESVSKLPSHKRQRQEHTDEHSDESSEEENSQFSADNSFSLTSTVGEAGIIESIQ
LKNFMCHSMLGPFQFGSNLNFIIGNNGSGKSSVLTALIVGLGGKATATNRGSSLKMFVKS
GETSADISVTLQNQGRDAFKPELYGDSIIVNTHINLEGSRTYRLKSKSGAIISSKKEELL
GMLDHFNIQVENPVSVLTQEMSKLFLQSKNEGDKYKFFMKATQLEQMKEDYSYIMKTKEN
TRLQIEQGVERLKELKRIYCEEKERYESIECVNEMQKHLEELKHKMAWAVVAEMEREIQP
IREGIKAEEGNTEKFDQKLEECQIKINEAEEQCKAIQEKLITVNGEAEALHAQCMSSKAE
VQTRRKAVNEAEVLYNRVRTELKRLAKDDEQLRNRIEEMKKRAYQASEPERLEKQRKITQ
LKEKLKALHDEEIMMGQQMDQFQQAIYKHKEEFAKLKREDSDVRQDLDGKQKHLRELRDS
KTNAFKRFGQHMPSLLEEVEKAYRQGQFKYKPVGPLGAFIHPKDPELSLAIEACLKTLVQ
AFCCDNHSDERILQQLMSKYYPRGARPSIIVNKFHDKIYDVRHSGVHHPEFPSVLTALEI
DGAAVANCLINVRGIEKVLLIKSSYKAREVMQSNNPPKNCREAFTAEGDQVFNRRYYSSD
YLRPKYLSKDVEAEISLLENEVASRKAQLAASQQRLSSTENEIKQNESHLHHHRQHQKEL
QIKIRRTAAEIADLENVDEIQYMDIRVLEDVAEENKKKMETVKQEMQEESRKMEELNEIL
RAAEKRFEEIKEKMSQVEDITNPIKDELDKADSEVENRRRRLQYYEDKKKEHLTCIKKHK
ELLAAKEKELEEKTAQARQIYSERIEVSRTVKSLDAEMNRLRERIKTEKSHRGNTEEIIQ
RFLDAKERYEDANSKVNNLKKFIRVLEEIMTQRFNIYRRFLRLLSLRCKLYFDHLLRIRG
CSGRILFDHKNETLLITVQPGEEDRPAPSNVRSLSGGERSFSTVCFILSLWSITESPFRC
LDEFDVYMDMLNRRIAMDMILKVADSQCYRQFILLTPQSMSFLPVSSRIRILRMQDPERG
QRTLTFRNRNEEEEDD
NT seq 3291 nt   +upstreamnt  +downstreamnt
atgggtaagagaaaggaagaaagtgtttcaaagcttccatcccacaaaagacagagacaa
gaacatacagatgaacatagtgatgagtccagtgaggaagaaaactcccagttttcagct
gataatagtttctctttaacatcgactgtaggagaagctgggataattgaaagtatccag
ctgaagaacttcatgtgccattcgatgttggggccttttcagtttggatcaaatctcaat
tttattattggaaacaatggaagtggaaaaagttctgttttaactgcgctgattgttgga
cttggaggaaaagccactgctactaatagaggttcctcattaaaaatgtttgtaaaaagt
ggagagacttctgcagatatctcagtaacactgcaaaaccaaggcagagatgcatttaaa
ccagaactgtacggtgactctattattgtgaatacacacattaacctggaagggagcaga
acttacagactgaaaagcaaatctggcgctatcatttcttcaaagaaggaggaactctta
ggaatgctggatcactttaacatacaggtagaaaatcctgtgtctgtgttaacccaagag
atgagtaagctcttcttacagtctaaaaatgagggtgacaagtataagttctttatgaag
gcaactcagctggaacaaatgaaagaagattattcatatatcatgaaaactaaagaaaat
acacgtcttcagatagaacaaggagtagagcgtctaaaagagcttaagcgaatttactgt
gaagaaaaggaacgctatgaaagcatcgagtgtgtgaatgaaatgcaaaagcatcttgaa
gagctgaaacataaaatggcatgggcagtggtggctgagatggagagagaaatacagccg
atcagagaaggcatcaaagctgaagaaggaaatactgaaaagtttgatcagaagctggaa
gaatgtcagataaaaataaatgaagcagaagaacagtgcaaagcaatacaagagaagttg
ataacagtaaatggtgaagcagaagccctgcatgctcagtgtatgtcttcaaaagctgaa
gttcagacaagaagaaaagcagtcaatgaagctgaggtgctttataatcgcgtcagaact
gagttgaaacgtctggcaaaagatgatgaacaactacgtaaccgaattgaggaaatgaaa
aagagagcttatcaggcttcagagcctgaaaggctggaaaaacaaaggaaaattacacag
ttaaaggagaagctgaaggcacttcatgatgaagaaataatgatgggccaacagatggat
cagtttcagcaagctatttataagcataaagaagagtttgctaaacttaagagagaagac
tctgatgtgagacaagacttggatggtaaacagaagcacctgagagagctgagagatagt
aaaacaaatgcctttaaaagatttggacaacatatgccatcattgcttgaagaagttgaa
aaagcctataggcaagggcaatttaaatacaaacctgttggacctttaggtgctttcatt
catccaaaagatcctgaactgtccctggctattgaagcttgtttaaagaccttagttcag
gcattttgctgtgataatcatagtgatgaaagaattcttcagcaactgatgtcaaaatat
tatccacgtggggctagaccttcaataattgtaaataaatttcatgataagatttatgat
gttagacacagtggagttcatcatccagagttcccgtcagttctcacagcgttggaaata
gatggtgcagcggttgctaactgtttgatcaatgtgaggggtatagaaaaagtcctgcta
attaaaagtagctataaagctcgtgaagtaatgcagtctaacaatcctccaaaaaattgt
agagaagctttcactgctgaaggtgatcaagtgtttaacagacgatattattcttctgat
tacctcagacccaagtatctaagcaaagatgttgaagcagaaataagtctcttggagaat
gaagttgcaagccggaaagcacagttggcggcatctcagcaacgtttgtcttccactgaa
aatgaaattaagcagaatgaaagtcatcttcatcatcatcgacaacaccaaaaagaacta
cagataaaaatacgaagaacagctgcagaaatagcagatcttgagaatgtcgatgaaatc
cagtatatggacatccgtgtattagaagacgtggctgaagaaaacaaaaaaaagatggaa
actgtaaaacaagaaatgcaggaagaaagcagaaaaatggaagaactgaatgagatactt
cgggcagctgagaaaagatttgaagaaattaaagagaaaatgagtcaagtagaagatatc
actaatccaattaaggatgaattggacaaagcagactcagaagtggaaaacagaagacgt
cgtttgcagtactatgaagacaaaaagaaagaacatttgacttgcataaaaaaacataaa
gaattactagctgccaaagagaaagaattggaggaaaaaactgcacaggctaggcaaatc
tactcagagcgcatagaagtcagccgtactgtgaagagtcttgatgcagaaatgaatcgc
ttgagagagaggataaagacagaaaaaagtcaccgtggaaacacagaagaaataatacag
cgatttcttgatgcaaaggaaagatatgaagatgcaaacagcaaagtaaataacttaaag
aaatttattagggtgctggaagaaataatgacacagagattcaacatatatcgtcggttc
ttaaggctcctttccttacgatgcaaactgtactttgaccacttactgcgcattcgaggc
tgcagtggaagaatactttttgatcacaaaaatgagacacttttgataacagttcagcct
ggagaggaggacagacctgccccaagcaatgtgagatctttatcaggaggcgaacgttcc
ttctcaacagtttgtttcattctttctctgtggtccattactgaatctcctttcagatgc
ctggatgaatttgacgtctacatggatatgctcaacagaagaattgcaatggatatgatt
ctgaaggtggctgactctcagtgttatcggcagttcattttgctcaccccgcaaagcatg
agttttctgcctgtaagttcccgtattcgtatcctccgaatgcaagaccctgaaagaggc
caaagaacattgacgttccgtaataggaacgaagaagaggaagatgattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (51)   
   KEGG ORTHOLOGY (1)   
   RefGene (45)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (11)   
   RefSeq(nuc) (3)   
   GenBank (4)   
   EMBL (4)   
Protein domain (8)   
   Pfam (8)   
All databases (77)   

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