KEGG   Gallus gallus (chicken): 421951
Entry
421951            CDS       T01006                                 
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
  KO
K15338  holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gga03400]
    421951 (GEN1)
DNA repair and recombination proteins [BR:gga03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     421951 (GEN1)
SSDB
Motif
Pfam: XPG_I Chromo_2 XPG_N
Other DBs
NCBI-GeneID: 421951
NCBI-ProteinID: XP_004935834
CGNC: 12330
UniProt: A0A8V0X5F3
Position
3:100170205..100190556
AA seq 954 aa
MGVNNLWQILEPVRQPVSLSSLKGKTLAVDLSLWVCEAQTVKKMIGVVTKPHLRNLFFRY
SFFTSMGIKLVFVMEGEAPKLKADTMSKRNEIRYGASNKHGVARTGRSSFKSILKECLQL
LECLGVPWVQAAGEAEAMCAYLNAKGHVDGCITNDGDVFLYGAQTVYRNFAMNSKEPHLD
CYTMSSIKEKLGCDRESLIGLAVLLGCDYLPKGIPGVGKEQALKLIETLRGQNLLQRFEQ
WKEQSEHDNNPPLVVKRVVHCSECHHPGSYKEHERGGCKFCESTRYCKPSDSKYCCPCEW
HQLEQVKQASAVEDNIRKKAKSCEGFPFSEVIQEFIVNKNELNKIMECKRPNLLSFQIFA
SEKMEWSKHYAYMTMDPGYLKWIHKKNSKMQITISISVFSWHPVPVTQEFSGPEIVKTRV
KNGIPCFEIEWQKPEHYVDAEDEPMDLHVVTIEEESLFQAAYPDVVSLYQMEKSEALAKK
QKNKKNRPKEKELSDAYGEVTNLLSQMNFKTAYEIIPVPDHTSDGKTPPEYQICQRSTES
KDPVMAAASCVTSVQMSESVGLSLTASPCLHLQSTSTDSSVVPVQSTKNSGVSSSVMADL
QLSSTDRKGTFFSTSPTHGYYTCDPAADLTAYIKHSYPLHRSSEYSGAAQSDQDHSDSAD
DLLSDGRMEQLQKLSLRERILKMTSVPSKLMLPEDVMPQEPFRHFKHTEAALKLDNLSSS
CQLNKLVRDTKNMLPETCASESSAPVSQEGDTLHEMIQKDHNISSSTSLVPSGQTTELLH
SVCEVLPQPQKPANVVPVCNVTKAYTQTAWKTSFKSVCQGKCSSSEDSDDGNMNKNPICK
QKKRQLNPDQFKKTFAKKRYNTASIKSTSSDSALVIKGREKTTNFKQVGGNLSLEVFPED
SSVVEVDCSQSSEQLFQGVGSSPAQQADSDVLISAWADSPLPLSERLKRRLKSN
NT seq 2865 nt   +upstreamnt  +downstreamnt
atgggagtgaataatctgtggcaaatcctggagcctgtgaggcagcctgtaagcttgagt
agtctcaaaggaaagacacttgctgttgatttaagtctgtgggtttgtgaagcacagaca
gttaaaaagatgattggagtagttaccaagccacatctgagaaacctattttttcggtac
tcttttttcacatcaatgggaattaaactggtgtttgtcatggaaggcgaggcacccaag
ctgaaggcagacaccatgagtaagagaaatgagatacgatatggagcttccaacaaacat
ggggttgcaagaacagggagatcttcttttaaatccattctaaaagagtgcctccagctg
ctggagtgtttaggtgttccatgggttcaagcagctggggaagcagaagcaatgtgtgct
tacctgaatgcaaaaggccatgtcgatgggtgcattaccaatgatggagatgttttctta
tatggagctcaaacagtttataggaactttgccatgaattctaaggagccacatcttgac
tgctacacaatgtcctctattaaggagaagcttggttgtgacagagagtctttgattgga
ctagctgttcttctgggttgtgattatcttccaaagggcattccaggagttggaaaagaa
caagctttaaaattaattgagactttgagaggtcaaaatttactgcaaaggtttgagcaa
tggaaagaacaatctgaacatgataataatccacctttggttgttaaaagagtagtgcac
tgttctgagtgccatcatccaggatcatacaaggaacatgagcgcggtggatgtaaattc
tgtgaaagcactagatactgcaaacccagtgactccaaatactgctgcccttgtgaatgg
catcagttagagcaagtgaaacaagcaagtgcagtggaggacaatatcagaaaaaaagct
aagagttgtgaaggctttccattctctgaggttatccaagaatttattgtaaacaagaat
gaactgaacaagataatggaatgcaaaaggccaaatttattgtcatttcagatatttgct
tctgagaagatggaatggtcaaagcattatgcttacatgactatggatcctgggtactta
aaatggatacacaagaaaaacagcaagatgcaaataactatttccatctcagtattttcc
tggcatccagttcctgttactcaggagttctctgggccagagatagtcaagacacgtgtt
aaaaatggaattccctgttttgaaattgagtggcaaaaaccagaacactatgttgatgca
gaagatgagcctatggatttgcatgtagttacaatagaagaggagtctttgtttcaggct
gcttatccagatgttgtttctctttaccaaatggaaaagtcagaagctctggcaaagaaa
cagaaaaacaagaaaaacagaccgaaagaaaaggagttatcagatgcttatggtgaagtt
accaatcttctgtctcaaatgaatttcaagactgcatatgaaattattcctgtgccagac
cacacatctgatggaaaaactccacctgaatatcagatatgccagagaagcacagaatca
aaagatccagtaatggctgcagcttcttgtgtaacatctgttcaaatgtcagaatcagtt
ggactttctctgacagcatcaccttgcttacacttacagagtacatcgactgactcatct
gtagtgccagtacagtctactaaaaactcaggagtgtcatcttctgtaatggcagatcta
caactgagcagtactgataggaaaggaaccttcttcagcacttcaccaacccatggatat
tatacctgtgatccagcagctgacttgactgcgtacataaaacactcatatccactacat
cgtagctcagaatattctggtgctgcacagtcagaccaagatcattctgatagtgcagat
gatttgctttcagatggccgtatggaacagcttcaaaagttgtctttaagggagcgtata
cttaagatgacttctgttccatcaaagcttatgctgccagaagatgtaatgccacaggag
cctttcagacactttaaacacacagaagcagcattgaaacttgataatctctcttcctca
tgtcagttaaataaactagtgcgagacactaaaaatatgctaccagaaacctgtgcaagt
gaatccagtgcacctgtttcacaagaaggtgacaccctgcatgaaatgatacagaaagac
cataatataagcagttcaacatctctagtccccagtggacaaacaacagagctgttgcat
agtgtgtgtgaagtgcttccacagcctcaaaagccagcaaatgttgttcctgtctgtaac
gttacaaaagcttatactcagactgcttggaaaacttcttttaagagtgtgtgtcagggc
aagtgctcttctagcgaggacagtgatgatgggaacatgaataaaaatccaatttgtaag
cagaagaaaagacaactgaaccctgaccagtttaaaaaaacttttgcgaagaaaaggtat
aacactgctagtatcaaaagtacaagcagtgactcagcacttgtaattaaagggagggag
aaaaccaccaattttaagcaagttggtgggaatttgtcgttagaggtctttccagaagat
tcctctgtagttgaagttgattgttcccaaagttcagaacagctgtttcagggtgtaggt
tccagtcctgcacaacaagctgacagtgatgttctgatttctgcgtgggcggacagtccc
cttcccctgtctgaaagactaaaaagaagactcaaaagcaattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (10)   
   RefSeq(nuc) (8)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

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