KEGG   Gallus gallus (chicken): 424278
Entry
424278            CDS       T01006                                 
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
  KO
K13179  ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gga03041]
    424278 (DDX18)
   03009 Ribosome biogenesis [BR:gga03009]
    424278 (DDX18)
Enzymes [BR:gga01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     424278 (DDX18)
Spliceosome [BR:gga03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    424278 (DDX18)
Ribosome biogenesis [BR:gga03009]
 Eukaryotic type
  90S particles
   Helicases
    424278 (DDX18)
  Pre-60S particles
    424278 (DDX18)
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII Cwf_Cwc_15
Other DBs
NCBI-GeneID: 424278
NCBI-ProteinID: XP_422125
CGNC: 9216
Ensembl: ENSGALG00000012147
Position
7:complement(28922728..28931255)
AA seq 662 aa
MRVAGPALPSPRVIEGGKERAAGMSVSVAAGNLPMRLLRKKIHKRNLKLRQRNLKLRAAE
QEGQASLGPPEEDEEVKEAAAPEAEAETEAGEQAAPGPEAVGAKRRKKKKRKAAAGPEGG
TETKKAKAEEDVSVEAEDEDGQDTGEKEAEEEDEVPSLPLGLTGAFEDNSFTSLAGLVSE
NTLKGISDMGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKLKFMP
RNGTGVIILSPTRELAMQTYGVLKELMNHHVHTYGLIMGGSNRSAEAQKLGNGINIIVAT
PGRLLDHMQNTPGFMYKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQT
RKVEDLAKISLKKEPLYVGVDDNKETATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKL
MVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARG
LDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRYLKQARVPL
SEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKAYIRAYDSHSLKQIYNVGNLDLNK
VSLSFGFKVPPYVDLNVNSNQGRRLQKRGGGGGFGYQKPKSVHKAKIFKHISKKSDNRQF
SR
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgcgtgtcgctgggccggcgctgccgtctccacgtgtgattgagggaggcaaggagcgg
gccgccgggatgtcggtgtcggtggccgcgggcaacctgcccatgcggctgctccgcaag
aagatccacaagaggaacctgaagctgcggcagcgcaacctgaagctgcgggctgccgag
caggaaggccaggcctcgctcggtcccccggaggaggacgaggaggtgaaggaggcggcg
gcccccgaggcggaggcagagacagaggcgggcgagcaggcagcgccgggccccgaggcc
gttggggcgaagaggaggaagaagaagaaaaggaaagctgctgctggccccgagggaggt
acagaaactaagaaagcaaaagctgaagaagacgtatctgtggaggcagaagatgaagat
gggcaggatacaggagagaaagaagcggaagaggaggacgaggtacccagtttacctctg
ggtctgacaggtgcctttgaagacaattcttttacttcccttgctggtctcgtcagtgag
aatacattgaaaggcatcagtgatatgggctttacacacatgacagaaatccagcataaa
agtattaaacctctactggaagggagggatattttagcagctgccaaaacaggcagtggc
aaaacacttgcatttctcattcctgcagtagagctcatctacaagttaaaattcatgcct
agaaatgggacaggtgttattattctttcacctactcgagagcttgctatgcaaacctat
ggagttcttaaagaacttatgaatcatcatgttcacacctatggtctgatcatggggggc
agtaacagatcagcagaagctcagaaacttggaaatggaatcaacataattgtagcaaca
ccaggaagacttctggatcatatgcagaacactccaggtttcatgtacaagaacttgcag
tgtttggtgattgatgaggcagatcgaatcttagaggttggatttgaggaagaaatgaaa
cagatcataaaacttctaccaaagcgcagacagacaatgctgttttctgctacacaaacc
aggaaggtggaagatctagccaagatctctctgaagaaagaaccactgtatgtaggagtt
gatgataacaaggagacagcaacagtagatggccttgaacagggctacgtagtgtgtcca
tctgaaaaaagattccttttgctcttcacattcctgaagaagaaccggaagaagaaacta
atggtatttttttcttcatgtatgtcagtgaagtaccactatgaactactcaactacatt
gatttgcctgttttggccattcacggcaagcagaaacaaacaaaacgtactacaacattt
ttccagttctgtaatgcagaatctggaatcctgttgtgcactgatgtagctgccagagga
ctggatattcctgaggtggactggattgtccagtatgaccctccagatgatccaaaagag
tatattcatcgtgttggtagaactgccagaggtataaatggtagaggacatgctctgctc
attttacgtccagaagaactgggctttcttcgttacctgaaacaagccagggtaccactc
agtgaatttgaattttcctggtcaaagatttcagatatccagtctcagctggagaaactg
attgagaagaactacttccttcacaagtcagcccaggaagcatacaaagcttacattaga
gcttatgactcccattctctgaagcagatctataacgtgggtaacctggatcttaacaaa
gtcagcctctcatttggctttaaagtccctccgtatgttgacctcaatgtgaacagcaac
caaggcagaagactacagaaaagaggtggaggtggaggatttggttaccagaaaccaaag
agcgtccacaaagctaaaatcttcaagcacatcagcaagaaatcagacaatcggcaattt
tctcgttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (45)   

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