KEGG   Gallus gallus (chicken): 425131
Entry
425131            CDS       T01006                                 
Symbol
TRIM3
Name
(RefSeq) tripartite motif-containing protein 3 isoform X1
  KO
K11997  tripartite motif-containing protein 2/3
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gga04121]
    425131 (TRIM3)
Ubiquitin system [BR:gga04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    425131 (TRIM3)
SSDB
Motif
Pfam: NHL Filamin DUF5128 SGL zf-B_box zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_2 zf-RING_5 zf-RING_2 Invasin_D3 zf-C3HC4_4 Prok-RING_4 zf-ANAPC11 zf-RING_11 YtkA
Other DBs
NCBI-GeneID: 425131
NCBI-ProteinID: XP_004939021
CGNC: 2493
Ensembl: ENSGALG00000034004
Position
1:complement(197413239..197421223)
AA seq 747 aa
MAKREANASPVVRQIDKQFLVCSICLDRYRNPKVLPCLHTFCERCLQNYIPPQSLTLSCP
VCRQTSILPERGVAALQNNFFITNLMEVLQRDPDSRGPHPGPGLDPVSAVTGQPLSCPNH
EGKVMEFYCESCETAMCRECTEGEHREHVTVPLRDVVEQHKAALQQQLDAIRGRLPQLAA
AIALVSEISQQLVERKNEAVSEIGSTFEELERALQQRKGLLVRDLEAICGTKQKVLQAQL
EVLRQGQENILSSCAFTEQALHHGTAPEVLLVRKQMSERLSALASQEFPEHPHENDQLDY
VVETDGVRKSILNLGVLITTSATAHKTVATGEGLRHAVVGQPASLSVTTKDKDGELVRSG
SACLRFVVTGPDGGAAESEVQDNKNGTYELLYTPRAEGDFQLSIALYGQPIRGSPFRVRA
VKASDVPPSPDDVKRRVKSPSSGHIRQKAVRRPSSMYSSGKKKENPIEDELIFRVGSRGR
EKGEFTNLQGISTSSTGRIVVADSNNQCVQVFSNEGQFRLRFGVRGRSPGQLQRPTGVTV
DMNGDIIIADYDNRWVSIFSPEGKFKTKIGAGRLLGPKGVAVDRNGHIIVVDNKACCVFI
FQSNGKLVTKFGSRGTAERQFAGTLDGPHFVAVNNKNEIVVTDFHNHSVKVYNADGEFLF
KFGSHGEGNGQFNAPTGVAVDANGNIIVADWGNSRIQVFDSAGSFLSYINTAADPLYGPQ
GLALTSDGHVVVADSGNHCFKAYRYLQ
NT seq 2244 nt   +upstreamnt  +downstreamnt
atggcgaagcgggaggccaacgccagtccggtggtgcggcagattgacaaacagttcctg
gtgtgcagcatctgcctcgaccgctaccgcaaccccaaggtgctgccgtgcctgcacacc
ttctgtgagaggtgtctccagaactatatcccgccccagagcctgaccctgtcctgcccc
gtgtgccgccagacctccatcctgcccgagcgtggcgtggcggccctgcagaacaacttc
ttcatcaccaacctcatggaagtgctgcagcgcgaccccgacagccgcggcccccaccct
ggcccggggctggaccccgtcagcgccgtcaccgggcagcccctgtcgtgccccaaccac
gagggcaaggtgatggagttctactgcgagtcctgcgagacggccatgtgccgcgagtgc
accgagggcgagcaccgggagcacgtcaccgtgccgctgcgcgacgtggtggagcagcac
aaggcggccctgcagcagcagctggatgccatccgcggcaggctcccgcagctggcggcc
gccatcgcgctggtgtcggagatcagccagcagctggtggagcgcaagaacgaggcggtg
tcggagatcggcagcaccttcgaggagctggagagggccctgcagcagcgcaaggggctt
ctggtgcgcgacctggaggccatctgtgggaccaagcagaaggtgcttcaggcacagctg
gaggtgctgcgccagggccaggagaacatcctgagcagctgcgcgttcacggagcaggct
ctgcaccacggcacggcgcccgaggtgcttctggtgcgcaagcagatgagcgagcggctg
agcgctctggccagccaggagttccccgagcacccgcatgagaacgaccagctggactac
gtggtggagaccgacggcgtgcggaagtccatcctcaacctgggagttctgatcaccacc
agcgccacggcgcacaagacggtggccacgggcgaggggctgcggcacgcggtggtgggg
cagcccgcttcgctcagcgtcaccaccaaggacaaggacggcgagttggtgcgcagcggc
agcgcctgcctgcgcttcgtggtgacggggccggacggcggcgctgccgagagcgaggtg
caggacaacaagaacgggacctacgagctgctctacacgccgcgcgccgagggcgacttc
cagctgtccatcgcgctgtacgggcagcccatccgcgggagccccttccgcgtgcgcgcc
gtcaaagccagcgatgtgccgccgtccccggacgacgtgaagcgccgcgtcaagtcgccc
agcagcggccacatccggcagaaggcggtgcggcggccctccagcatgtacagcagcggc
aagaagaaggagaaccccatcgaggacgaactcatcttccgcgtggggagccgcggccgg
gagaagggcgagttcaccaacctgcagggcatctccacctccagcaccggccgcatcgtg
gtggccgacagcaataaccaatgcgtgcaggtgttctccaacgaggggcagttccggctg
cgcttcggggtgcgcggccgctccccggggcagctgcagcgcccaaccggcgtcaccgtg
gacatgaacggggacatcatcatcgccgactatgacaaccgctgggtcagcatcttctcc
cccgagggcaaattcaagacgaagatcggcgccgggcggctgctgggccccaagggcgtc
gcggtggaccgcaacgggcacatcatcgtggtggacaacaaggcgtgctgcgtcttcatc
ttccagtccaacggcaagctggtcaccaagttcgggagccgcggcacggccgagcggcag
tttgcaggtacactcgatgggccacactttgtggcggtcaacaacaagaatgagatcgtg
gtgacggacttccacaaccactcggtgaaggtgtacaatgcggatggagagttcctcttc
aagtttgggtcgcacggggagggcaatgggcagttcaatgcgcccaccggtgtggccgtg
gatgccaatgggaacatcatcgtggccgactggggcaacagccgcatccaggtgttcgac
agcgcggggtcgttcctgtcctacatcaacacggcggcggatccgctgtacggcccgcag
gggttggcgctcacgtcggacggccacgtggtggtggcggactcgggcaaccactgcttc
aaggcgtaccgctacctgcagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (12)   
   RefSeq(nuc) (10)   
   GenBank (1)   
   EMBL (1)   
Protein domain (17)   
   Pfam (17)   
All databases (59)   

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