KEGG   Gallus gallus (chicken): 425772
Entry
425772            CDS       T01006                                 
Symbol
TRIM27
Name
(RefSeq) zinc finger protein RFP
  KO
K12000  tripartite motif-containing protein 7
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gga04121]
    425772 (TRIM27)
Ubiquitin system [BR:gga04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    425772 (TRIM27)
SSDB
Motif
Pfam: SPRY PRY zf-B_box zf-C3HC4_4 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_5 zf-C3HC4_3 zf-RING_2 Sina_RING zf-Nse zf-RING_6 U-box MDMPI_N zf-ANAPC11 zf-RING_11 DUF2390
Other DBs
NCBI-GeneID: 425772
NCBI-ProteinID: NP_001092824
CGNC: 52568
Ensembl: ENSGALG00000038278
UniProt: A5HUJ4
Position
16:complement(2454629..2458853)
AA seq 505 aa
MEAPPAPPAVPPAPCSAARSLQDELTCPVCLEYFTDPVLVAECGHNFCRACVTQCWEDSA
RRLCCPQCREPVPQRLFRPNRSLGNIVHIVRQLGLPPGPADPPPGPPAPAPPLPVAAPPG
PPGPPRCPRHGEPLRLFCVQDRRAVCVVCHLSREHRTHTVLPAEEAAHAAEEVPQEHLSS
LRKGREEAKAERERQSEDLLKQTEVERQKIVAECKELRGFLEEKEQLLLSRLEELDRDIV
KRRDESVSRLSEEIAQLDKLLGEHGGENGPGSTAVTTAGSSFESWMFCKPEPGFAELEKK
LKSFSQKSAVLKEVLLEFKENLRFELENDTGDLSLDPDTANPYLVLSEDKRSVRLRSAPQ
ELPANPKRFDYSFCVLAAEGFVAGRHYWEVEVGDGESWVLGAARESVRRKEKIDFAPEEG
IWAVGLNWKGKNWDQYQAFTSPETPLSLCERPRKIGVYLDYEGGWVAFYNADNMAPIFTF
TAAFTEKIFPFFWLFYVGSSLSLCN
NT seq 1518 nt   +upstreamnt  +downstreamnt
atggaggccccgcccgctccccccgccgtgccgcccgccccctgcagcgctgcgcggagc
cttcaggacgagctcacctgcccggtgtgcttggagtacttcaccgacccggtgctggtg
gcggaatgcggccataatttctgccgggcctgcgtgacgcagtgctgggaggactccgcg
cggcggctgtgctgcccgcagtgccgcgaaccggtcccgcagcggctgttccgccccaac
cgctccctcgggaacatcgtccacatcgtccggcagctcgggctgccccccggccccgcc
gacccccccccgggcccacccgcccccgctccgccgctccccgtggcggctcctccgggt
cctccgggccctccccgctgtccccgtcacggcgaaccgctgcggttgttctgcgttcag
gaccggagggcggtgtgcgttgtgtgccacctctcccgggagcaccgcacccacactgtg
ctgcccgccgaggaggcggcccacgcggcggaggaggttccccaggagcacctgagctcc
ctgcggaaagggcgagaagaagcgaaggctgagagggagaggcagagtgaggacctgctg
aagcagaccgaagtggagaggcagaaaatcgtggctgagtgcaaagagctgcggggtttc
ctggaggagaaggagcagctcctgctgtcccgcctggaggaactggacagggacatcgtg
aagaggagagatgagagcgtctcgaggctctcggaggagattgcccagctggataagctg
ctgggggagcacgggggagagaatggccccgggagcacggctgtcaccacagctggaagc
agctttgagagctggatgttctgcaagccggagcccggcttcgccgagctggagaagaaa
ctgaagagcttctcccaaaagagtgccgtgctgaaagaagtgctgctagagttcaaggag
aaccttcggtttgagctggagaacgatacaggagacctctctctggacccggacacggcc
aacccctacctggtgctgtcggaggacaagaggagcgtgcggctgcgaagtgccccccag
gagcttcctgccaaccccaagagattcgattactccttctgcgtgctggcagctgagggt
tttgtggcagggaggcactactgggaggtggaggtgggcgatggggagagctgggtgctg
ggagcggcgcgcgagtcggtgcggaggaaggagaagatcgatttcgcccctgaggagggg
atctgggcagtggggctgaactggaaggggaagaattgggatcagtaccaggctttcacc
tcccccgagacacccctgtccctgtgtgagagaccccggaagatcggggtgtacctggac
tacgagggggggtgggtggcgttttacaacgccgataacatggctcccatcttcaccttc
acggccgccttcaccgaaaagattttccctttcttctggctcttctacgtgggctcctcg
ctctccctgtgcaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (18)   
   Pfam (18)   
All databases (57)   

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