KEGG   Gallus gallus (chicken): 426906
Entry
426906            CDS       T01006                                 
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gga04131]
    426906 (COPA)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gga04147]
    426906 (COPA)
Membrane trafficking [BR:gga04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    426906 (COPA)
Exosome [BR:gga04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   426906 (COPA)
  Exosomal proteins of bladder cancer cells
   426906 (COPA)
SSDB
Motif
Pfam: COPI_C Coatomer_WDAD WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 426906
NCBI-ProteinID: NP_001026576
CGNC: 6964
Ensembl: ENSGALG00000009153
UniProt: Q5F354
Position
25:complement(2389123..2407527)
AA seq 1224 aa
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSSAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVAERVRILRNCGQKSLAYLTAATHGLDEEAENLKETFDP
EKETIPDIDPNAKLLQPPAPVMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDNV
GTEGWGEDAELQLDEDGFVDAGEGFGEEGLGKGQEEGGGWEVEEDLDLPPELDVPAGPAG
GAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAMRLLHDQVGVTNFGPYKQLFL
QTYARGRTTYQALPCLPTMYGYPHRNWKEAGLKNALPAVGLKLNDLIQRLQLCYQLTTAG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEH
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYCPEFQGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgctgactaagttcgagaccaaatcggctcgggtgaaagggctcagcttccaccctaag
cggccgtggatcctcaccagcctacataatggcgtcatccagctgtgggactatcgtatg
tgcacccttatcgacaagttcgacgagcacgatggacctgttcgaggtattgatttccac
aagcagcagcctctgtttgtttctggaggtgatgactataaaataaaggtctggaattac
aaactacgccgctgtcttttcactctgcttgggcatttggactacatccgcaccaccttc
ttccatcatgaatatccgtggatcttgagtgcttctgatgatcagaccattcgggtttgg
aactggcagtccagaacttgtgtctgtgtgctgacaggacacaaccactatgtgatgtgt
gcccagtttcacccctctgaggacctggtagtatcagccagcttggatcagactgtacgc
gtttgggatatttctggcttaaggaagaagaacctctcccctggagctgtggagtcggat
gtcaggggaataactggggtggatttgtttgggacaacagatgcagttgtgaagcacgtt
cttgagggccacgatcgtggagtgaactgggctgccttccatcccacaatgccactgatt
gtgtcaggagctgatgatcgacaagtgaagatctggaggatgaacgaatcaaaggcctgg
gaggttgacacttgccgggggcattacaacaatgtctcgtgtgctgtctttcaccctcgg
caggagctcatcctcagcaattcagaagacaaaagcatccgtgtctgggatatgtcaaaa
cgcacgggtgtccagaccttccgccgtgatcatgatcgtttttgggtattggctgctcat
cccaatctcaacctctttgctgcaggccatgatggtggcatgattgtcttcaaactggaa
cgtgagcgtcctgcttatgcagtacatgggaatatgctgtattatgtaaaggaccgattc
ctccgccaacttgactttaacagctcaaaagacgttgctgttatgcagctgcgcagtggt
tccaagttccctgtgttcaacatgtcgtacaacccagctgagaatgctgtccttctctgc
actagagcaagcaacctggagaatagcacttatgacctatacaccattcccaaggatgca
gactcccagaatccagatgcccctgaagggaagcgttcctccgggctaacagctgtgtgg
gtagctcgtaaccgctttgcagtcctggatcgcatgcattcgatcctcatcaaaaacttg
aagaatgagatcacaaagaaggttcaggtgccgaactgtgatgagattttctatgctggc
acagggaacctgttactgagagatgcagactccatcaccctctttgacgtgcagcagaag
cggactctggcctcagtgaagatctccaaggtgaaatatgtcatctggtcagctgacatg
tcccatgtagctctgttggctaagcatgccatcatgatctgcaacagaaagctggaatcg
ctgtgtaacatccatgaaaatatccgtgtcaagagtagtgcctgggatgaaagtggtgtt
ttcatctataccaccagcaaccacatcaaatacgctgtcaccacaggggaccatggcatc
atccgcaccctggacctgcctatctatgttactcgtgtgaaggggaacaatgtgtactgc
ctggacagagaatgtcgccccagggtccttaccattgatcccacagagttcaaattcaag
ctggcattgatcaacagaaagtatgatgaggtgctgcacatggtgaggaatgctaagctt
gtgggccagtccatcattgcttacctgcagaaaaagggttaccctgaggtggccctgcac
tttgttaaggatgagaagacccgtttcagtctggcactggagtgtggcaacattgagatt
gccctggaagcagccaaggctctggatgacaagaattgctgggagaaactgggagaagtg
gcactactgcaaggaaatcaccagattgtggagatgtgctaccagcgcaccaagaacttt
gataggctctccttcctctatcttattactggcaacctggagaagcttcggaagatgatg
aagatagctgagatccgtaaagatatgagtggccactaccagaatgccttgtatctagga
gatgtggcagagagagtgaggatcctgaggaactgtggacaaaagtctctggcctatctc
acagctgcaactcatggtctggatgaggaagctgaaaacctgaaggaaacatttgatcct
gaaaaggaaacgattccagacattgatcccaatgcaaaactactgcagcctcctgctcct
gtcatgcccctagataccaactggccattgctgactgtctccaaggggttctttgaagga
acaattgctagcaaaggcaaagggggtgccttggctgctgacatagatattgacaatgtc
ggtactgaaggctggggagaagatgcagaattacagcttgatgaagatggctttgtagat
gctggagaaggctttggagaggaaggtctgggtaaaggacaggaagaaggaggtggatgg
gaagttgaagaagatttggatcttcctcctgaactggatgttcctgctggtccagcagga
ggagcagaagatggcttctttgtgccacccaccaagggcaccagcccggctcaggtatgg
tgtaacaattcacagcttcctgttgaccacattctggcaggttcctttgagacagcaatg
agactcctccatgatcaggtgggagtaactaactttggaccctacaagcagctgttcctg
cagacctatgcccgtggccgtacaacctaccaagccctgccatgtctccctaccatgtat
ggctacccacatcgcaactggaaagaagctggcttgaagaatgccctcccagctgttggg
ctgaagcttaatgacctgatccagcgcttgcagctgtgctaccagctcacaacagctggc
aagtttgaggaggctgtggagaagttccgctccatcttgctgagtgtgcccttgctggtg
gtggacaataagcaggagattgctgaggcccagcagctgatagccatctgtcgggagtac
attgtaggactctcaatggagatcgagcggaagaagctgcccaaggagaccctggagcac
cagaagcgaatctgtgagatggctgcctatttcacccactccaacctgcagcctgtccac
atgatcttggtactgcgcactgctctcaacctcttcttcaaactcaaaaacttcaagaca
gctgctacttttgctcgtcggctgctggagctgggtccaaagcctgaggtggcccagcag
acccgcaagatactgtcagcatgtgagaagaatcccactgacacctaccagctcaactat
gacatgcacaacccctttgacatctgtgctgcctcctaccgacccatctatcgtggcaag
cctgtggagaagtgtccactcagtggagcttgctattgccctgagttccaggggcagatt
tgccgtgtcacaacagtgacagagattggcaaagatgtcattgggctgcggatcagcccc
ctccaattccgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (41)   

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