KEGG   Gallus gallus (chicken): 777179
Entry
777179            CDS       T01006                                 
Symbol
SOX12
Name
(RefSeq) transcription factor SOX-12
  KO
K09268  transcription factor SOX11/12 (SOX group C)
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gga03000]
    777179 (SOX12)
Transcription factors [BR:gga03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    777179 (SOX12)
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 777179
NCBI-ProteinID: XP_015151955
CGNC: 58675
Ensembl: ENSGALG00000035951
Position
20:complement(9971253..9974966)
AA seq 285 aa
MVQRAMRGRGSEGRREPCAPLPAHDAEPAWCKTPSGHIKRPMNAFMVWSQHERRKIMDQW
PDMHNAEISKRLGRRWQLLHDSEKIPFVKEAERLRLKHMADYPDYKYRPRKKGKAGTATA
RPRLPVKIKPSVLGRVPAARRQPSKPPPEPCTAQRPPEPPAEDRSGTATWNAVPTGERGP
AAAAGPEPCPESASPSPAPAGSPPSSLGSSDEELEEELLGALPARAPGGTACGAVDCSVL
DKDLDLFPRGASSHFEFPDYCTPEVTEMIAGDWLMSSISDLVFTY
NT seq 858 nt   +upstreamnt  +downstreamnt
atggtgcagcgagccatgcggggaaggggctcggaggggcggcgggagccctgcgcccct
ctgcccgcccacgacgcggagcccgcctggtgcaaaacgcccagcgggcacatcaagcgg
cccatgaacgccttcatggtgtggtcgcagcacgagcgccgcaagatcatggaccagtgg
cccgacatgcacaacgccgagatctccaagcgcctgggtcggcgctggcagctcctgcac
gactccgagaagatcccctttgtgaaggaggccgagcgcctgcgcctcaagcacatggcc
gactaccccgactacaaataccgccctcggaaaaagggcaaagcgggcaccgccaccgcc
cgcccgcgtctcccggtgaagatcaaaccctcggtgctgggccgcgtccccgccgcccgc
aggcagccctccaagccgccccccgagccgtgcaccgcgcagcgcccgccggagccgccc
gccgaggaccgctccggcacggccacgtggaacgcggtgcccaccggcgagcgcggcccc
gcggccgccgccggccccgagccgtgcccggagagcgcgtccccgtctcccgcacccgcc
ggttcgcctccgtcctccttgggctcctcggacgaggagttggaggaggagctgctgggc
gcgctgcccgcgcgggcgccgggtggcacagcgtgcggggctgtggactgctccgtcctg
gataaggacctcgatctcttcccgcggggcgcgtcgtcgcacttcgagttcccggactat
tgcacgcccgaggtgacggagatgatcgcgggggactggctcatgtccagcatctcggac
ttggtctttacctactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (44)   

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