KEGG T07453: 109287566

Gavialis gangeticus (Gharial): 109287566

Entry

109287566         CDS       T07453

Symbol

TRIM8

Name

(RefSeq) probable E3 ubiquitin-protein ligase TRIM8

K12001

tripartite motif-containing protein 8 [EC:2.3.2.27]

Organism

ggn Gavialis gangeticus (Gharial)

Brite

KEGG Orthology (KO) [BR:ggn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ggn04121]
    109287566 (TRIM8)
Enzymes [BR:ggn01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109287566 (TRIM8)
Ubiquitin system [BR:ggn04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    109287566 (TRIM8)

SSDB

Motif

Pfam:

zf-RING_UBOX zf-C3HC4_4 zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-B_box zf-RING_10 zf-RING_5 U-box

Other DBs

NCBI-GeneID:

109287566

NCBI-ProteinID:

XP_019358283

Position

Unknown

AA seq 551 aa
MAENWKNCFEEELICPICLHVFVEPVQLPCKHNFCRGCIGEAWAKETGLVRCPECNQAYN
QKPNLEKNLKLTNIVEKFNSLNLEKTPSVLHCVFCRRGPPLPAQKICLRCEAPCCQSHVQ
THLQQPSTARGHLLVEADDVRAWSCPQHNAYRLYHCEAEQVAVCQFCCYYSGAHQGHSVC
DVEIRRNEIRKMLMKQQDRLEEREQDIEEQLYKLESDKRLVEEKVSQLKDEVRLQYEKMH
QILDEDLRKTMEILDKAQAKFCTENAAQVLHLNERMQEAKKLLSSVQVMFDKTEDINFMK
NTKSVKILMDRTQNCTGGSLPPPKIGHLNSKLFLNEIAKKEKQLRKLLEGPFSTPVPFLQ
SIPMYPCSVSTPGAEKRKHSAAFPEGSFLEPSSGAVASQYMTQGASAGEGQSAQPMVPCS
STQHIVGLPSGPQPVHSGAVFNPSHYPNSTSSQQSVLSQYGGRKILVCSVDNCYCSSVSN
HSGHQPYPRSGHFPWTVSSQEYSHPLPPAPTVPQSLPGLAVREWIDASQQHGRQDFYRVY
GQPSAKHYVTS

NT seq 1656 nt +upstreamnt +downstreamnt
atggctgagaattggaagaactgtttcgaggaggagctgatctgccccatctgcctgcat
gtcttcgtggaacctgttcaacttccttgcaagcacaatttctgccggggctgcatcggg
gaggcgtgggccaaagagacggggctcgtgcgctgccccgaatgcaaccaggcctacaac
cagaagcccaacctggagaagaacttgaagttgaccaacatcgtggagaaattcaactcg
ctcaacctggagaagacgccctcggtcttgcattgcgtcttctgccgcaggggccccccg
ctgccggcccagaagatctgcctgaggtgcgaggcgccctgctgccagtctcacgtgcag
acccacctgcagcagccctccacggcccgcgggcacctcctggtggaggcggacgacgtg
cgggcctggagctgcccccagcacaacgcctaccggctgtaccactgtgaagcggagcag
gtcgccgtgtgccagttctgctgctactacagcggggcccaccagggacactccgtgtgc
gatgtggagatccgtcgcaacgagatccggaagatgctgatgaagcagcaggaccggctg
gaggagcgggagcaggacatcgaggagcagctctacaagctggagtccgacaagcggctg
gtcgaggagaaggtgagtcagctgaaggacgaggtgcgcctgcagtacgagaagatgcac
cagatcctggacgaggacctgcgcaagaccatggagatcctggacaaggcccaggccaag
ttctgcaccgagaacgcggcccaggtgctgcacctcaacgagcgcatgcaggaggccaag
aagctgctcagctccgtccaggtcatgttcgacaagaccgaggacatcaactttatgaag
aacaccaagtccgtgaaaatcttaatggacaggactcagaactgcacgggtgggagcctc
cccccacccaagatcggccacctcaactccaagctcttcctgaacgagatcgccaagaag
gagaagcagctgaggaagctgctggagggtcccttcagcacgccggtccccttcctgcag
agcatccccatgtacccctgcagcgtcagcacccccggcgcggagaaacgcaagcactcc
gcggccttcccggaaggcagcttcctcgagccatcatccggagcggtcgcgagccagtac
atgacccaaggggcttcggctggcgagggccaatccgcacaacccatggtgccttgtagc
tccacgcagcacatcgtcggacttcccagcggcccccagcccgtccactccggggctgtg
ttcaacccctcccactaccccaatagcacatcatctcagcagtctgtgctctcccagtac
ggcgggcgcaaaatccttgtctgctctgtggacaactgttactgttcctcggtgtccaac
cacagcgggcaccagccctacccgcggtcgggccacttcccctggacagtctcctcgcag
gaatactcccacccgctgccccccgccccgactgtcccccagtcgctcccgggacttgcc
gtgagggagtggattgacgcctcccagcagcacggacgccaggatttctatagagtctac
ggtcagccttctgccaaacactatgtcaccagttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (22)   

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