KEGG   Gossypium hirsutum (upland cotton): 107888666
Entry
107888666         CDS       T04793                                 
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107888666
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107888666
   03016 Transfer RNA biogenesis [BR:ghi03016]
    107888666
Enzymes [BR:ghi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     107888666
Messenger RNA biogenesis [BR:ghi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     107888666
Transfer RNA biogenesis [BR:ghi03016]
 Prokaryotic type
  tRNA degradation factors
   107888666
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 Urease_gamma SAM_MT
Other DBs
NCBI-GeneID: 107888666
NCBI-ProteinID: XP_016668326
UniProt: A0A1U8HQR4
Position
A09:9264974..9273659
AA seq 980 aa
MAMFSLAIRARAKANPLLTRRALHFRNFCNGRFGLSTSESNPPDRPVAGTKFLESFKEEF
EIGSRVISLETGKIARFANGAVVLGMEETKVLSTVAAAKGDAVRDFLPLTVDYQEKQFAQ
GLIPNTFMRREGAPKERELLCGRLIDRPIRPLFSAGFYHEIQVMASVLSSDGKQDPDVLA
ANATSAALMLSDIPWGGPIGVVRIGRICGQFIVNPTMDELSLSDLNLVYACTRDKTLMID
VQAREITEKDLEAGLRLAHPEAVKYLEPQIRLAAKAGKQKKEYKLSMVSEQFFEKVRKLA
EAPIDAVFTDPSYGKFERGEALEKITQDVKSALGEECDEQSLKVLPKVVDTVRKKVVRKR
IISDGFRLDGRHLDEVRPIYCEAGHLPILHGSALFNRGDTQVLCTVTLGAPQDAQRLDSL
VGPPTKRFMLHYSFPPFCIDEIGKRAGLNRREVGHGTLAEKALLAVLPPEDDFPYTVRIN
SEVMASDGSTSMATVCGGSMALMDAGIPLREHVAGVSVGLVTDVDRESGEITEYRILTDI
LGLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIICESLEPARKGRLQILDHMEQEI
SVPRNQDDRNSPRLVTLKFSNDAIRRFIGPLGALKRKIEEETGARISVGDGTITIAAKNQ
AVMEKVQDKVDFIVGREIVVGGIYKGIVMSIKEYGAFVEFNGGQQGLLHISELSHEPVSR
VSDVVSVGQQISLMCIGQDVRGNIKLSRKATLPRPESETKSVVEGSAPVTKEKPNIWASP
ENMSKGEQLESTLEELVPSKMENTESNRSASLMPSVVIRSAAECDEEEKSAGLSKTSKSA
PKPKGTLKKGSKQKKIQSSDNMPDLSLSIMLSESLSRMGGNQEVTSQDEGEANLSDQNDK
ETGGNTPVTPQKLKLGTKVTAKIYQIRARGLVLDLGGGIRGMYKYESNGEREFTVGDELL
VQCSSFTSKGIPVMSMVEEE
NT seq 2943 nt   +upstreamnt  +downstreamnt
atggcaatgttctcactagctatcagagctcgagccaaagctaaccctctcctaacacgg
agagccttacattttcgcaacttttgcaacggccgttttggtttatcgacgtcggagtcc
aacccgcctgaccggccagtggcggggaccaagtttctcgagtctttcaaagaagagttc
gaaattggatctcgggtaatttcgcttgaaacgggtaaaattgctcgttttgctaatggg
gccgttgttttgggcatggaagagaccaaagttttgtccactgttgctgccgctaaaggc
gacgctgttcgagactttctaccgcttactgttgattatcaagagaagcaatttgctcaa
ggtctgattccaaacacattcatgcggagggagggtgctccaaaagaacgtgaactttta
tgtggtcgtctcattgataggcccatacggcctcttttttccgctggcttttaccatgag
atccaggtaatggcaagtgttctttcttctgatggcaaacaagatccagatgtgttggca
gctaatgcgacttctgctgctcttatgttatcagatattccatggggtggacccattgga
gtggtacggatagggagaatttgcgggcagtttattgttaatccaacaatggatgagctt
agtttaagtgatctcaacttggtatatgcatgtacgagggacaaaaccttgatgattgat
gtgcaagctcgcgaaatcactgagaaagatttagaagctggtttaaggctggctcatccg
gaagcagttaaatatctggaacctcaaatcagactggctgcaaaagctggcaaacaaaag
aaggaatacaaattatccatggtctcagaacaattctttgagaaagttagaaagctggcg
gaagcaccaattgatgctgtttttacagatccttcctatggaaagtttgaacgtggcgag
gctttagagaagataacacaagatgtaaaaagtgcacttggagaagaatgcgatgagcaa
agcttaaaagttctgccaaaggttgtggacactgtcaggaaaaaggttgttcgcaaaaga
attatttctgatggatttagacttgatggaagacatcttgatgaagttcggccaatatac
tgtgaggctggccatttgcctatattacatggatctgctctttttaaccgtggggatact
caggttctttgtactgtgacacttggggcacctcaggatgcccaacgcttggactccttg
gttggtcccccaacgaagcgcttcatgcttcactatagttttccaccgttttgtatcgat
gaaattggtaaacgagctggcttgaacagacgtgaagtagggcatggaactcttgcggag
aaagctcttcttgctgtattgcctcctgaagatgattttccatacactgttcgaattaat
tctgaagtcatggcttcagatggttcaacatctatggctactgtttgtggaggcagtatg
gctttgatggatgctggcattccattacgagaacatgttgcaggtgtttcagtcggtctt
gttactgatgttgaccgagaaagtggtgaaattacggagtatcgtatattgactgatatt
ttgggtcttgaagatcatctgggagacatggatttcaagattgctgggacaaggaatgga
gttacagcaattcaattggacataaaacctgctgggattcctttagatataatatgcgag
tctttggagcctgcacgtaaaggacgccttcaaatccttgatcacatggaacaagagatt
agcgtgcctcgaaatcaagatgatagaaattctcctcgtctagtaactttgaagtttagc
aatgatgctattcggcgatttattgggcctttaggtgctctcaaaagaaaaattgaagag
gaaactggtgctcggatctctgttggtgatgggacaattactatagctgctaaaaatcag
gctgtgatggaaaaagtgcaagataaggttgatttcatcgttggccgtgaaatcgtagtt
ggaggaatctataaaggtattgtgatgtcaattaaagaatatggtgcctttgtggagttt
aatggtggacagcaaggtctgctacacatttctgagctatcacatgaaccggtgtctcgt
gtttcagacgtggtgtctgttggccagcaaatttctttgatgtgcataggacaagatgtt
cgtggtaatataaaattatctcgtaaagcaactttaccccggcctgaatccgagacaaaa
agtgtagttgaaggatctgctcctgttactaaagaaaaacctaatatttgggcatcacct
gagaacatgtcaaaaggtgaacagctggagtccactctcgaggagctggtgccgagtaaa
atggagaatactgaatcaaaccgatccgcctctttaatgccatcagtagtaattcgaagt
gctgcggagtgtgacgaggaggagaagtctgctggtttgagtaagacttccaaaagtgct
cctaaaccaaagggcacgttgaaaaagggtagtaaacagaaaaagatccagtcttctgat
aacatgcctgatttgtctctcagtattatgttatcggaatccttatcccgaatgggaggg
aatcaagaagttacttctcaagatgaaggtgaggctaatctgagtgatcagaatgacaag
gaaactggtggtaacactccagtgacacctcaaaaactgaagctaggaacaaaagttact
gctaagatttatcaaattcgagcacgtggtttagttctcgatttgggtggtggaattcgt
ggcatgtacaagtatgagtccaatggtgagagggagtttactgtaggtgacgaattgcta
gtccaatgttcaagttttacaagtaaaggtatcccggtcatgtctatggtggaggaagaa
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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