KEGG   Gossypium hirsutum (upland cotton): 107888796
Entry
107888796         CDS       T04793                                 
Name
(RefSeq) zeta-carotene desaturase, chloroplastic/chromoplastic
  KO
K00514  zeta-carotene desaturase [EC:1.3.5.6]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00906  Carotenoid biosynthesis
ghi01100  Metabolic pathways
ghi01110  Biosynthesis of secondary metabolites
Module
ghi_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00906 Carotenoid biosynthesis
    107888796
Enzymes [BR:ghi01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.6  9,9'-dicis-zeta-carotene desaturase
     107888796
SSDB
Motif
Pfam: Amino_oxidase NAD_binding_8 DAO MCRA FAD_oxidored HI0933_like FAD_binding_2 Pyr_redox_2 FAD_binding_3 NAD_binding_9 Pyr_redox AlaDh_PNT_C GIDA 3HCDH_N
Other DBs
NCBI-GeneID: 107888796
NCBI-ProteinID: XP_016668509
UniProt: A0A1U8HYR1
Position
A11:109250529..109255923
AA seq 564 aa
MASASVLFAATGLGSMVRVKSTRLFVKSSLDTNVSDMSVNAPKGLFPPEPEHYRGPKLKV
AIIGAGLAGMSTAVELLDQGHEVDIFESRPFIGGKVGSFVDRKGNHIEMGLHVFFGCYNN
LFRLMKKVGADQNLLVKDHTHTFVNKGGEIGELDFRFPVGAPIHGISAFLSTNQLKTYDK
ARNAVALALSPVVKALVDPDGAMRDIRDLDSISFSDWFLSKGGTRMSIQRMWDPVAYALG
FIDCDNISARCMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIRNYITERGGRFHMRWGC
REILYDKFADREIYVTGLAMSKATNQKIVKADAYVAACDVPGIKRLLPSEWRELQFFNNI
YELVGVPVVTVQLRYNGWVTELRDLEQSRKLRQAVGLDNLLYTPDADFSCFADLALTSPE
DYYIEGQGSLLQCVLTPGDPYMPLPNDEIIKRVAKQVLALFPSSQGLEITWSSVVKIGQS
LYREGPGKDPFRPDQKTPIKNFFLAGSYTKQDYIDSMEGATLSGRQASAYICDAGEELVA
LQKKLAAIESHQQLETSSDELSLV
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggcttctgcttctgttctgtttgcagccactggtttgggttcaatggttcgggtcaag
tctacaaggctctttgtgaagtcttctttggataccaatgtttctgatatgagtgttaat
gctccaaagggattgtttccacctgaacctgaacattatagaggaccaaagctgaaggtg
gctattattggagctggtcttgctggcatgtcaacagctgttgagctattggatcaaggc
catgaggttgatatattcgagtctaggcctttcatcggaggcaaagtaggttcttttgtt
gataggaaaggaaaccacattgagatggggctgcatgttttttttggttgctacaacaat
ctattccggttgatgaaaaaggtgggtgcagatcaaaatctacttgtgaaggatcatact
cacacatttgtaaacaaagggggtgaaattggtgaacttgattttagatttccagttgga
gctcccatccatggaattagtgccttcttatctacaaatcaactgaagacgtatgataaa
gcaagaaatgccgtggcacttgccctaagtccagttgtgaaggctcttgtcgatccagat
ggagcgatgagggatataagagatttggatagtataagcttctctgattggtttttgtct
aaaggtggtacacgcatgagtatccagagaatgtgggatcctgttgcttatgccttgggt
tttatcgactgtgataacataagtgctcgttgcatgctcactattttctcattgtttgcc
accaagacagaggcttctcttctgcgaatgctgaagggttctccggatgtttacttgagt
ggtcccatcagaaattatatcacagaaagaggaggcaggttccatatgaggtggggatgc
agagagatactttatgataaattcgctgatagagagatatatgtcacgggacttgccatg
tctaaagctacaaaccagaaaattgtaaaagctgatgcttacgttgctgcatgtgatgtc
cccggaataaaaagattgcttccatcagagtggagggaattgcaattttttaataacatt
tacgagttagtaggagtgccagttgttaccgtgcaacttagatacaacggctgggtgaca
gagttgcgggatctggagcagtcaaggaaactgaggcaagctgttggccttgataatctc
ctgtacactccggatgcagatttctcctgctttgcagacttagctctcacttctccagaa
gattactacatcgagggacaaggttcattgctccaatgtgtcttgacaccaggtgaccct
tacatgccattgccgaatgatgaaatcataaagagagtagcgaagcaggttttggcttta
ttcccatcatcccaaggtttagaaattacttggtcatctgttgtcaaaatcgggcaatct
ctatatcgcgaaggacctggaaaagatccattcagacctgatcagaagacaccaataaag
aacttctttcttgctggatcttatacaaagcaggattatatagatagtatggaaggagca
actttgtctggcaggcaagcatcagcctacatatgtgatgctggggaagagttagtggcc
ctgcaaaagaaactcgctgcaattgaatctcatcaacagttggaaacttcttctgatgaa
ttaagccttgtataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (12)   
   KEGG COMPOUND (12)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (14)   
   Pfam (14)   
All databases (50)   

Download RDF
DBGET integrated database retrieval system