KEGG   Gossypium hirsutum (upland cotton): 107891147
Entry
107891147         CDS       T04793                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 8-like
  KO
K14649  transcription initiation factor TFIID subunit 8
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107891147
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ghi03021]
    107891147
Transcription machinery [BR:ghi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     107891147
SSDB
Motif
Pfam: Bromo_TP TAF8_C Bromo_TP_like TFIID-31kDa
Other DBs
NCBI-GeneID: 107891147
NCBI-ProteinID: XP_016671323
UniProt: A0A1U8I527
Position
D09:44955843..44957086
AA seq 370 aa
MSHGDVKSTRDTIKSENQQRLSLGRLKADEFGRAVSKIAVAQICESVGFQGFKESALEAL
TDILVCYLCDLGRNASFYANLAGRTECNLFDITRALEELEASHGFPSASDIGHCLVGSGT
VREIFRFVDSEEEIPFAQPVPKFPIVRNRKLIPSFEHMNEKPPGKHIPTWLPAFPDPHTY
IHTPMWNERASDPCADKIEQARQRRKAEKALLQLQQRLVCNGSSGTSTSLATDAEKEKVQ
GGESNPFLAAPLQPGEKDVSQVVSPAKPTDEASKGDHVSMLEAFAPAIEAMKGGPSDGEK
LHLSEKRAAVHFKFRAGKKILGEPLDLSLQKKGERGTTAFLRIEERDDKKRRAEFILRQT
TEFPMELNQS
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgagccatggagatgtgaaaagtacaagagacacaataaagagtgaaaaccagcagagg
ttgtcgctgggaagactgaaagctgatgaatttggaagagcggtttcaaagattgcggtg
gcacagatatgcgagagtgtaggttttcagggatttaaagagtctgctttggaggctctt
actgatatcttagtttgttacctttgtgacttaggaagaaatgctagtttttatgctaat
ttagctggtaggacggaatgcaatctgtttgatataactcgggctttagaagagttggaa
gcttcacatggatttccgagtgcttccgatattgggcattgtcttgtaggctctggcaca
gttagggaaatatttcggtttgtggattcggaagaggaaatcccatttgctcagccagtg
ccgaagtttccaattgttagaaataggaagttgattccaagttttgagcatatgaatgaa
aagccgccgggcaagcatatcccaacttggttgccagctttccctgatccacacacttat
atccatacacccatgtggaatgagagggcatcggatccttgtgctgataagattgagcaa
gcaaggcagcggagaaaggccgagaaggctttgctgcagttgcaacagaggctggtatgt
aatggttcttctggaacttcaacttccttggccacggatgctgaaaaggaaaaagtacaa
gggggtgaaagtaatccttttcttgctgccccactgcaaccaggagagaaagatgtttcg
caggttgtttccccagctaagcctactgatgaagcaagcaagggtgatcatgtttccatg
ctagaggcatttgctcctgccattgaagcaatgaaaggggggccatcagatggtgaaaaa
ctacacctttccgaaaagagggccgctgttcatttcaagtttagagccggcaagaaaatc
ttgggtgagccgctagatttgagcttgcagaagaaaggtgagagggggacaacagcattt
ttgcgtattgaggagagggacgataagaaaaggagagctgagtttattctcagacaaacc
acggaatttccgatggaacttaatcagtcttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system