KEGG   Gossypium hirsutum (upland cotton): 107896488
Entry
107896488         CDS       T04793                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-1-like
  KO
K01309  ubiquitin carboxyl-terminal hydrolase MINDY-1/2 [EC:3.4.19.12]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107896488
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     107896488
Ubiquitin system [BR:ghi04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   MINDY
    107896488
SSDB
Motif
Pfam: MINDY_DUB
Other DBs
NCBI-GeneID: 107896488
NCBI-ProteinID: XP_016677161
UniProt: A0A1U8IGA5
Position
A09:complement(79753331..79759773)
AA seq 714 aa
MTGVAADGDFSSSLSKEKQVVEAAPIREGQNQEQQKQEGIKGCMHKTKTIQFLGRTTPII
LQNDNGPCPLLAICNVLLLRNNLNLSPDIAEVSQEKLLSLVAERLIDSNSNVNNKDEGFV
ENQQQNIADAIDLLPRLATGIDVNIKFRRIDDFEFTPECAIFDLLDIPLYHGWIVDPQDY
ETASAIGSKSYNAIMEELVALETRNMEVSHKNNSEDCVDFVAATTATLGVPSPSLSKTRS
FDESPRSASDQQILRKGDLEEEAELLRVLKLSEAKSPTSVGGSGSLAERSCSKNLVSVDA
QEGDRSIGNESMPLHEPYFSDDCRSLRNGSCSKACFETLRGEVSPKTDGINQNSSYVKSG
DGTLSNDAVENMAVKVSSADDLLQIEGAVPISLAEDTAPIDGNNTENSQGGENIEIQSTS
ATDAHYIPGNINGFDPTEVSSISLQKAGSDSSSDRIHNADVLEAFSSSLDGSEPIYEGED
CILDSVTTYENREPIYEGEVILAKQADNISVEVCTVRSKEEITPQQGELIANFLKNNANQ
LTFYGLFCLQDGLKERELCVFFRNNHFSTMFKYDGELYLLATDQGYLNQPDLVWEKLNEV
NGDTLFMTGNFKEFKVDSHATGTWDEQNATADYIAGIDGSAHARSDEISDLQLAIALQQE
EYEQQPQRQNVRPPPIVGATRLVTGPKASQNSGRSSSSSSSRQETKSKEKCIVM
NT seq 2145 nt   +upstreamnt  +downstreamnt
atgaccggtgttgctgccgacggtgacttttcatcgtcgctttccaaggaaaaacaagta
gtagaagcagcaccaatacgagaaggacagaatcaagaacaacaaaagcaagaagggatt
aaaggatgcatgcataagactaagacaattcagttcttaggtcgtaccacgcctattatt
ctccaaaacgacaatggaccttgccctctcctcgctatctgtaatgttctccttttaagg
aacaatttgaaccttagccctgatatagcagaagtttcacaggagaaattgctttcactg
gtggccgaacgcctcattgattccaacagtaatgtcaataataaagatgaaggttttgtt
gaaaatcagcagcagaatattgcagatgcaattgatttacttccacgtcttgctacaggg
attgatgtaaatatcaaattcaggagaatagatgattttgagttcactccagagtgtgcc
atatttgatctgcttgatattcccctctatcatggttggatagttgatccccaggactat
gaaactgctagtgctattgggtcaaaatcctacaatgcaattatggaggagcttgttgca
ctggaaacacgaaatatggaggtttcacacaaaaataattctgaagattgtgtggatttt
gttgctgctactactgcaactttaggagttccctctcctagcctgtcaaaaaccagatct
tttgatgagtctcctcgttctgcttcagatcagcaaatattaagaaaaggggaccttgag
gaggaagcagagctattgagagtcttgaaattatcagaggctaaatcaccgacctctgtt
ggtggttctggcagtttagctgaaagatcatgttcaaagaaccttgtttctgtagatgca
caagagggggacagaagtattggaaatgagagcatgcccctgcatgaaccttacttctca
gatgattgccgttccttgagaaatggtagttgtagtaaagcatgttttgagaccctcaga
ggtgaagtatccccaaagactgatgggattaatcagaattcttcttatgttaaatctgga
gatggtaccctttccaatgatgcagttgagaatatggctgttaaggtgagtagtgctgat
gatttgctccagattgaaggtgcagttcctatttctcttgcagaggatactgcacctata
gatggaaacaacactgaaaattcacaagggggtgaaaacattgagattcaatccacttct
gctaccgatgctcattacattccgggtaacataaatgggtttgacccaacagaagtatca
tctatctccctacaaaaagctggttcagattcgtctagtgacagaatacataatgctgat
gtgctagaagcttttagttctagtctcgatggaagtgagcctatatatgaaggagaagat
tgcatattagattcagtaactacatatgagaaccgggaacctatctacgaaggtgaggtt
attcttgcaaagcaagctgacaacatttctgtagaggtctgtactgtgaggtccaaagaa
gaaattactccacaacaaggtgaactaattgcaaacttcttgaagaacaatgccaatcaa
ttgaccttttatgggcttttttgcttacaagatggtcttaaagaacgtgagctctgtgtt
ttctttcgcaacaatcatttcagcacgatgtttaagtatgatggtgagctttatctttta
gctactgaccaaggctatctgaatcaaccagatttggtttgggagaaactaaatgaggtc
aacggagacactctttttatgactggaaacttcaaggaattcaaggtggatagtcatgcc
actggtacttgggatgaacaaaatgcaactgctgactacattgctggcattgatggttca
gcgcatgcaagatcggatgaaatctcggatttacagcttgcaatagctttacagcaagaa
gagtatgaacaacagccgcagcgtcagaatgtgcggccgccaccgattgtaggtgctaca
agattagtaacaggtccaaaggcgtcacaaaacagtggaaggagctcttcgtcttcatcg
tcaaggcaagagacaaaatctaaagaaaaatgtatcgtgatgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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