KEGG   Gossypium hirsutum (upland cotton): 107899485
Entry
107899485         CDS       T04793                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RZFP34 isoform X1
  KO
K10144  RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107899485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107899485
Enzymes [BR:ghi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107899485
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107899485
SSDB
Motif
Pfam: zinc_ribbon_6 zf-CHY zf-RING_2 zf-RING_5 zf-RING_UBOX zf-C3HC4 zf-RING_11 zf-C3HC4_4 zf-H2C2_2
Other DBs
NCBI-GeneID: 107899485
NCBI-ProteinID: XP_016680699
UniProt: A0A1U8IXP5
Position
D04:40958128..40960845
AA seq 283 aa
MEVDLEPKVLDTSSMTEKGYEEFGCSHYRRRCKIRAPCCDEIFDCRQCHNDAKNSIEIDP
FDRHEVPRHDIKRVICSLCDREQDVQQHCINCGVCMGKYFCSKCNFFDDDVSKKQYHCDG
CGICRIGGAENFFHCDKCGCCYSMMMKNSHKCVEKAMHHNCAVCFEFLFDTTKEITVLPC
GHTIHLECVREMERHSQYSCPVCSKSFCDMTRVWERLDRDVASTGMPQIYQNRRVWILCN
DCGENSEVNFHFVAHKCPICSSYNTKLTRGRIATGSSEIMKTV
NT seq 852 nt   +upstreamnt  +downstreamnt
atggaagttgatcttgaacccaaggtgttagacacttcatctatgacggagaagggatat
gaagaatttgggtgttcacactatagaagaagatgcaagatcagggcaccttgttgtgat
gagatatttgattgcagacagtgccataatgatgccaagaactcaattgaaattgatcct
tttgatcgtcatgaggttcctcgccatgatataaaaagggttatttgttccttgtgtgac
agagaacaagatgttcaacagcattgcattaactgtggggtctgcatgggaaagtatttc
tgttcaaaatgcaattttttcgatgatgatgtctcgaaaaaacagtaccattgtgatgga
tgcggcatctgcagaattggtggagcagagaactttttccattgtgataaatgcggatgt
tgctattctatgatgatgaagaactcccacaagtgtgttgaaaaagccatgcaccataat
tgcgctgtttgctttgagtttctctttgatacgacaaaagagataactgtcttaccctgt
ggacacacaatacatttggaatgtgtaagagagatggaacgacattcccagtattcatgt
cctgtttgctcaaaatcgttctgtgatatgacccgagtgtgggaacgacttgaccgagat
gttgcttcaacagggatgcctcaaatttaccagaataggagggtttggattctctgcaat
gactgtggggaaaattccgaggttaatttccattttgtggcacacaagtgcccaatatgc
agctcatacaataccaagctgacacgtggacgcattgctacaggttcatcagagattatg
aaaacagtttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (26)   

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