KEGG   Gossypium hirsutum (upland cotton): 107923566
Entry
107923566         CDS       T04793                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107923566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107923566
Enzymes [BR:ghi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107923566
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    107923566
SSDB
Motif
Pfam: Sina_TRAF Sina_ZnF Sina_RING zf-C3HC4_2 FAIM1 DZR
Other DBs
NCBI-GeneID: 107923566
NCBI-ProteinID: XP_040961868
Position
D11:complement(9024015..9027552)
AA seq 323 aa
MEFDSIDCMTSSDVIDDDDEIHHHNQLSSLLKSHSNNGSSNSIVSPAVHSSTTSVHELLE
CPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCK
YTSLGCPEIFPYYSKLKHEALCNFRPYNCPYAGSECTVVGGIPFLVAHLRDDHKVDMHSG
CTFNHRYVKSNPREVENATWMLTVFHCYGQYFCLHFEAFQLGMAPVYMAFLRFMGDEVES
RNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLR
VTGRIWKEQQNPEGGACIPNLCS
NT seq 972 nt   +upstreamnt  +downstreamnt
atggaatttgatagcattgattgtatgacatcttcagatgtgattgatgatgatgatgag
atccatcatcataatcagttgtcttcattgttgaagtcccatagcaacaatgggagcagc
aacagtattgtgtcacctgcggttcactcaagcaccaccagtgtccatgaacttctggaa
tgtcctgtttgtaccaattctatgtaccctcccatccatcagtgtcacaatgggcatact
ctctgttcgacctgtaaaacaagggtacacaatcggtgccccacttgtagacaggagctt
ggtgatattaggtgtctagcactagagaaggtagctgaatcacttgaactgccttgcaaa
tatacatcacttggatgcccggagatctttccttactacagtaaactcaaacatgaggcc
ctatgcaacttcaggccatacaattgcccatatgctggatcagaatgcactgttgttggt
ggtattccattccttgttgctcatctaagggatgaccacaaggttgacatgcattctgga
tgcacgtttaaccatcgttatgtgaagtccaatcctcgggaagtagaaaatgccacatgg
atgctaactgtattccactgttatggccagtacttctgtctccattttgaagccttccag
cttgggatggcccctgtttatatggcattccttcgtttcatgggtgatgaggttgaatcc
cgcaactacagttatagcctagaagttgggggcaatggcaggaaactcatttgggaaggc
actccaagaagcataagagatagccaccgaaaggtcagggatagccatgacggccttatt
atacagcgtaacatggcacttttcttctccggaggagataggaaagagttgaagctgcga
gtaaccggacggatatggaaagaacaacagaacccagaaggtggtgcctgcatacccaac
ctctgcagttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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