KEGG   Gossypium hirsutum (upland cotton): 107942382
Entry
107942382         CDS       T04793                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00040  Pentose and glucuronate interconversions
ghi01100  Metabolic pathways
Module
ghi_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    107942382
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     107942382
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 Beta_helix
Other DBs
NCBI-GeneID: 107942382
NCBI-ProteinID: XP_016731526
UniProt: A0A1U8MXF7
Position
D09:8304667..8306293
AA seq 408 aa
MAPHLNIVPSMFVLLLLFISASKVQSGAIDVVAKFGAKADGKTDLSKPFLDAWKEACASV
TPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIKAPADPGAFKDPNWVRFYSIENFKM
SGGGIFDGQGSIAYEKNKDPHNRAFRVKLPVNIRFDFVTNALIQDITSKDSKLFHVNVFA
CKNITLERFTVEAPADSPNTDGIHMGKSDGVNIIGCEIKTGDDCISIGDGTKNLDIKDIT
CGPGHGISIGSLGKYPNEEPVEGVKVTNCTITNTSNGARIKTWPGESPGIVSDVHFEDII
VNNVSSPILIDQKYCPWSKCKINEESKVKLSNISFKNIRGTSALPEAVKFICSGSSPCQN
VELADIDIKHTGPEPATSQCLNVKPKTSGKLNPTPCSSPVPKTLSATA
NT seq 1227 nt   +upstreamnt  +downstreamnt
atggcaccacaccttaatattgttccttccatgtttgtgcttttattattattcatttca
gcctctaaagttcaatcaggcgctattgatgttgttgccaagtttggcgcaaaagctgac
gggaaaacggatctgagtaagccatttttggatgcttggaaagaagcatgtgcctctgta
accccatcaacagttgtgattcctaaagggacatatttattatcaaaagtaaacttagaa
ggtccatgcaaggctcctattgagattaatgttcagggcactataaaggctccggctgat
cctggtgctttcaaggaccctaattgggttagattctatagtattgaaaatttcaaaatg
tccggcggaggaattttcgatggtcagggaagcattgcttatgagaagaataaagatccc
cacaatcgtgcatttcgtgtcaaactccccgttaatataaggtttgactttgtgaccaac
gcattgatacaagatataactagcaaagacagtaaactattccacgttaatgtttttgca
tgcaaaaacattaccctcgaacgtttcacggtagaggcaccggcagatagcccaaacaca
gatgggattcacatgggcaaatcagacggcgtaaatattattggatgtgagattaaaact
ggtgatgattgtatttctatcggagatggcactaaaaatttggacataaaagatataact
tgtggaccaggacatggtataagtatcggtagtcttggaaagtacccaaatgaagagcca
gttgagggagttaaagtcacaaactgcaccatcactaatacttcgaatggagctcgaatc
aaaacttggccaggcgaatctcctgggatagtatcagatgtacattttgaggatattatc
gtgaataatgtctcttcccctatcctaattgatcaaaaatattgcccatggagtaaatgc
aagataaatgaagaatcgaaagttaaactaagcaacattagcttcaagaacatccgtggc
acatctgcgcttccagaagctgtcaagtttatttgcagcggttcttcgccatgtcaaaat
gtggaacttgcagacattgatattaagcacaccggacctgaacccgcaacatcccaatgt
ttgaatgtcaagcctaaaactagtggcaaattaaacccgactccatgttccagccctgtc
ccaaaaaccctaagtgccaccgcttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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