KEGG   Gossypium hirsutum (upland cotton): 107950809
Entry
107950809         CDS       T04793                                 
Name
(RefSeq) polygalacturonase-like isoform X1
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00040  Pentose and glucuronate interconversions
ghi01100  Metabolic pathways
Module
ghi_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    107950809
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     107950809
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 NosD
Other DBs
NCBI-GeneID: 107950809
NCBI-ProteinID: XP_016741251
UniProt: A0A1U8NQI8
Position
D03:13658402..13660041
AA seq 270 aa
MIIVVHFLLIKQNLRFDFLTNAMIQDITTKDRKQFHVNVLGYKNITFEHFTVSAPDESPN
TDGIHIGRSDGVNVLNSEIKTGDDCVSIGDGSKNLVSNGVTCGPGHGTSIGSLELFKNEE
PVDGVTVKNCTFTNTSNGVRIKTWPGAEPGTCSNIHFEDITATNVSSPIIIDQKYCPRNK
CKINEESKVKLRNISFKNIHGTSALPEAVKIIYSATLPCENVELADIEITHSGPTGPVVS
QCSNVKPKVSGKQNPAPCSAPIPAKPTSAA
NT seq 813 nt   +upstreamnt  +downstreamnt
atgattattgtggttcacttcctattaattaaacagaacctaaggtttgattttttaacc
aacgcaatgatacaagatataactaccaaagacagaaagcagttccacgttaatgttcta
ggatacaaaaacattactttcgaacatttcactgtatctgcacctgatgaaagcccaaac
acagatgggattcacatcgggagatcagatggggtaaatgttcttaactcggagataaaa
actggtgatgattgtgtttcaattggggatggttccaaaaatttggttagcaatggagta
acttgtggaccaggacatggtaccagtattggcagtctcgaattgtttaaaaatgaagaa
cccgttgatggagttacagtaaaaaactgcaccttcactaacacttccaatggtgttaga
atcaaaacttggccaggtgctgaacccggcacttgttcgaacattcactttgaggatatt
accgcgaccaatgtcagttctcctattataattgatcagaaatattgcccacggaacaaa
tgcaaaataaatgaagaatcaaaagttaaactaagaaacattagtttcaaaaacattcac
ggcacttctgcgcttccagaagctgtcaagattatttacagcgctactttaccgtgtgaa
aatgtggaacttgccgacattgaaattacacacagtggaccgactggacctgtagtatca
caatgctcgaatgtgaagcctaaagttagtggcaaacaaaatccagctccatgttccgcc
cctatcccagcaaaacctacctcggctgcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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