KEGG   Gossypium hirsutum (upland cotton): 107951801
Entry
107951801         CDS       T04793                                 
Name
(RefSeq) DNA gyrase subunit B, chloroplastic/mitochondrial
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ghi03032]
    107951801
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107951801
Enzymes [BR:ghi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     107951801
DNA replication proteins [BR:ghi03032]
 Prokaryotic type
  DNA Topoisomerases
   107951801
DNA repair and recombination proteins [BR:ghi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      107951801
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim TOPRIM_C HATPase_c_3
Other DBs
NCBI-GeneID: 107951801
NCBI-ProteinID: XP_016742436
UniProt: A0A1U8NTX6
Position
A02:79716559..79732376
AA seq 728 aa
MALLPRYLYPHLPLRLMASRSHFFVHFPSFHSLASFPRHSIFFHPRTNFALKSICWFPVQ
NVLTPRAFMSSNITTEAFHGSKSSKAYNSEQIQVLEGLDPVRKRPGMYIGSTGPRGLHHL
VYEILDNAVDEAQAGFATQIDVVLHSDGSVSITDNGRGIPTDFHPVTKKSALETVLTVLH
AGGKFGGLSSGYSVSGGLHGVGLSVVNALSEALEVTVWRDGMEYRQKYSRGKPVMPLTCH
GLSTESKDRQGTCIWFWPDNKIFTTAIEFDYNTLAGRIRELAFLNPKLTITLKKEDNDPE
KSLYNEYFFAGGLFEYVKWLNADKKPLHDVLGFSRQIDGTIIDVALQWCSDAYSDTMLGY
ANSIRTIDDGTHIEGVKASLTRVLNNFGKKSKIIKDKDISLSGEHVREGLTCIISVKVSN
PEFEGQTKTRLGNPEVRKVVDQSVQEFLTEYLELHPDVLDSILSKSLNAFKAALAAKRAR
ELVRQKSVLKSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK
ILNIERRDEAAMYKNEEIQNLIIALGLGVKGEDFKIEHLRYHKIIILTDADVDGAHIRTL
LLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQVHYCYHDADLQKVLSSFPQNASYNIQR
FKGLGEMMPAQLWETTMDPEQRLLRQLVVEDAAEANRVFSSLMGAQVDARKELIQNFASK
INLDKLDI
NT seq 2187 nt   +upstreamnt  +downstreamnt
atggcgcttcttccgcgatatctttatcctcatcttcctcttcgtcttatggcctctcgc
tctcatttttttgttcattttccttcttttcattctctcgcttcctttcctcgtcattcc
atctttttccaccccaggacaaactttgcattgaagagcatttgctggtttccagttcaa
aatgtacttacgccaagggcatttatgtcttctaacatcacaactgaagcttttcatgga
agcaaaagctcgaaagcttataactctgagcaaattcaggttctggaaggattggaccct
gttagaaaaagacccggaatgtatattggaagtacaggtcctcgtggtttgcaccatttg
gtatacgagattttggataatgctgttgatgaggctcaagcaggttttgcaacacaaata
gatgttgttttacattcagatggttccgtgagcataactgataatgggcgtgggattcca
actgatttccatcctgtcacaaagaaatctgccttggaaacagtgttgacggtgttacat
gcaggtggcaagtttggtggcttaagtagtggttacagtgtctctggtggcttgcatggt
gtgggtttatctgtggttaatgccttatctgaggctttagaagtcactgtttggagagat
ggaatggaataccggcaaaaatattcacgggggaagcctgtaatgccactaacatgtcat
gggctttcaactgaatcaaaggatcgtcaagggacatgcatttggttttggcctgacaat
aaaatatttaccactgcaattgagtttgactacaacacacttgctggacgaattagagaa
cttgcttttctgaaccctaagcttactatcactcttaaaaaagaagataacgatccagag
aagagcctttataatgaatatttctttgctgggggactgtttgaatatgtgaaatggcta
aatgctgataagaaaccacttcatgatgtgctaggtttcagcagacaaatagatggaacc
ataattgatgttgctctccagtggtgttcagatgcatattcagatacaatgttgggttat
gccaacagcatacgaaccattgatgatggcacacatatagaaggggtcaaggcttcattg
acaagagtcctcaataactttggaaaaaagtctaagattatcaaggataaggatattagc
ttaagtggtgaacatgttagggagggactgacatgcattatttctgtgaaagtgtcaaat
ccagaatttgaaggacaaactaagacaagattgggaaatcctgaggtgcgaaaagtggtt
gatcaatctgttcaagagtttcttactgaatatttggagttgcatccagatgtacttgat
tcaatcctttccaagtccctaaatgctttcaaggcagctcttgcagcaaaaagggcaagg
gaattagtccggcaaaagagtgtgttaaaatcatcatctcttcctggaaaactggccgat
tgttcatccacaaatccagaagaatctgagattttcatagttgaaggagactcagctggt
ggcagtgccaagcaaggccgcgataggcgctttcaggccatccttcccctgaggggtaaa
attttgaatattgaaaggagggatgaggcagcaatgtacaaaaacgaagaaattcaaaat
ttgattattgctcttggacttggggtgaagggagaggattttaaaatagaacacctacgg
tatcataagatcattatcttaacagatgctgatgtagatggtgctcatatccgaactctg
cttctgacatttttcttcagatatcagagagccttatttgatgaaggttgcatttatgtt
ggtgttccacctctttacaaggttgaaaggggaaaacaagtacactattgttatcatgat
gcagaccttcaaaaggtcttgagctcgttcccgcagaatgcatcatacaacattcagaga
ttcaaaggtttgggtgagatgatgccagctcagctgtgggaaacaacaatggatcctgag
caaaggttactgaggcaattagtggttgaagatgcggctgaagctaatagagtgttttca
tcccttatgggtgctcaggtggatgcaaggaaggagctcatccagaattttgcaagcaag
atcaatctcgataagctggatatttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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