KEGG   Gossypium hirsutum (upland cotton): 107962198
Entry
107962198         CDS       T04793                                 
Name
(RefSeq) geranylgeranyl transferase type-2 subunit alpha 1
  KO
K14050  geranylgeranyl transferase type-2 subunit alpha [EC:2.5.1.60]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ghi01006]
    107962198
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107962198
Enzymes [BR:ghi01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     107962198
Prenyltransferases [BR:ghi01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   107962198
Membrane trafficking [BR:ghi04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    107962198
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    107962198
SSDB
Motif
Pfam: PPTA LRR_4 LRR_8 LRR_6 LRR_9 MetW
Other DBs
NCBI-GeneID: 107962198
NCBI-ProteinID: XP_016753988
UniProt: A0A1U8PUM2
Position
A05:complement(109791151..109797446)
AA seq 696 aa
MHGRPRKAPKPEEEAASVAKAQKLRALQTQFFSFHHNKIYTKEAVELSAKLLEINPESYT
AWNYRKLAVEHYLSQPDCNPDWIKSVLDDELRVVENALRQNFKSYGAWHHRKWVISKGHS
SIDNELRLLDKFQKADSRNFHAWNYRRFVAESMKRSEQDELKYTEDMIYKNFSNYSAWHN
RSVLLSALFEKKAEGFLSKEKVLPEEYEFIHQAIFTDPDDQSGWFYHLWLLDQTVTTDSP
LLASSWPGHGYDVFLVEDRCYNGSAFSPFTALHSDSGSFPIVLYFNQPVGGVSSSTVTVE
CGFNKNEDLLWKPLSASNSQTARVWVAHLKIPSSDLLSTVEVSVGHSKGIISTRGFEYSH
PSMFSFKVHVQPMERDFSQVSVAESISLREENFKIYGSQSEESIINSFNQLSIKNGHEST
ASNWRSEALAKEIECFRELLSLMDCKIGKLTLARLLMAYDVMSYPFANKLVHSEEVLELC
SDLMKLDPTHYQYYKDEHSMVLLQKVTSSKESLLQHCFQYKDSVSSAICGPICLRLNNLS
LSRMGAFEKLLWVQMLDLSHNELQSIEGLEAMQLLSCLSLRNNKLRSLTALEPLRKLKLL
RVLDISYNQIGDHSIDTTRYLCSSPLSHSVGSESNKDETVTSDVALIDNWEAFYIFKDFN
LNQLEIVGNTIADEKFKSVLVKIMPKLKQLDGKLLG
NT seq 2091 nt   +upstreamnt  +downstreamnt
atgcacggccgcccccgaaaagcaccgaaacctgaagaggaagcggcttcggttgccaaa
gctcagaagttgcgcgctctccaaactcaattcttctcctttcaccataataaaatttac
actaaagaggcggttgaacttagtgctaagcttcttgagatcaatcctgaatcgtacacc
gcttggaactataggaaactcgctgttgagcactatctgagtcagcccgattgtaatcct
gactggatcaaatctgttttagatgatgaactcagagtggtagagaacgcattgaggcaa
aattttaagtcatatggagcgtggcatcatcgaaaatgggttatcagcaagggccattca
tcgatcgataatgagctgagattgctggacaagttccagaaggctgattctcgtaatttc
catgcatggaattataggagatttgttgcagagtcaatgaagagatcagaacaggatgaa
ttgaagtacactgaggatatgatttataaaaattttagtaactactctgcatggcataat
cgaagtgtattgttgtctgctttatttgagaaaaaggctgaaggatttctctcgaaagag
aaggtcttgccagaggaatatgaattcatacatcaagctatatttacagaccctgatgat
caaagtggatggttttatcatctttggctactagaccaaacagttacaactgactctcct
ctacttgcttcgtcttggcctggtcatggttatgatgtctttttagtggaagatagatgc
tataatggttctgcattttctccatttactgctttgcattctgattcagggtcgtttcct
attgttctttattttaatcaacctgttgggggtgtaagctcatctacagttactgtagaa
tgtggatttaataaaaatgaagatcttctttggaaaccactttctgcaagcaactcacaa
actgcacgagtttgggttgcacatttaaaaattccatcttcagatcttctttctactgtt
gaagttagtgttggacattctaagggaatcatttcaacaagagggtttgaatatagccat
ccttcaatgttttcatttaaagtacatgtacagcctatggaaagagatttctctcaagtt
tctgttgcagaaagtatttcattgagagaagaaaattttaagatctatggatcacaatcg
gaggaatcaattattaactcttttaatcaactaagtatcaagaatggtcatgaatcaact
gcatctaactggcgctctgaggctttagctaaagagattgaatgcttccgtgaactgtta
tcgttgatggactgtaaaattggaaagctcacacttgctagattactgatggcttatgat
gtaatgtcatatccatttgctaacaaactggtgcattcagaagaagttcttgagctgtgt
agtgatttgatgaaattggatccaacacattaccagtactacaaggatgaacatagcatg
gtcttgctacagaaggtgacttctagtaaagagtcattacttcaacattgctttcagtat
aaggactcagtttcatcagccatatgtggtcctatctgtctccggctgaacaacttatcg
ctatcacggatgggagcttttgagaaattattgtgggttcaaatgttagatctcagccac
aatgaactacaatcaattgaaggattggaagctatgcagctcctctcttgtttgagtttg
agaaacaataaactgagaagtttaactgctctggagcctttgagaaagctcaagttatta
agagtactggatatttcatacaaccagattggcgatcattctattgacacaacaaggtac
ttgtgctcttctcctttgtctcattcagttggaagtgaatcgaacaaggatgaaaccgtg
accagcgatgttgctcttattgacaattgggaggctttttatatttttaaagacttcaac
ttgaatcaattagagatagtggggaacacaattgctgatgaaaagtttaagtcagttctg
gttaagattatgcctaaacttaagcaattagatggtaaactcttaggttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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