KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107109113
Entry
107109113         CDS       T04299                                 
Symbol
KDM2A
Name
(RefSeq) lysine demethylase 2A
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:gja00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    107109113 (KDM2A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gja03000]
    107109113 (KDM2A)
   04121 Ubiquitin system [BR:gja04121]
    107109113 (KDM2A)
   03036 Chromosome and associated proteins [BR:gja03036]
    107109113 (KDM2A)
Enzymes [BR:gja01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     107109113 (KDM2A)
Transcription factors [BR:gja03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    107109113 (KDM2A)
Ubiquitin system [BR:gja04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     107109113 (KDM2A)
Chromosome and associated proteins [BR:gja03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    107109113 (KDM2A)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107109113 (KDM2A)
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD F-box JmjC Cupin_8 LRR_4
Other DBs
NCBI-GeneID: 107109113
NCBI-ProteinID: XP_015265168
Position
Un
AA seq 1177 aa
MAAAASIKGQKKARDLEEEEDDSSSDISFSLSSEESEMEPEEERIRYSKRLRGAMRRRYE
DDGISDDEIEGKRTFDLEEKLTTNKFNANFVVFMEGKDFTVEYIQRGGLRDPLIFKNSDG
LGIKMPEPDFSVSDVRLYVGSRRMVDVMDVNTQRDIEMTMAQWARYYETPEEEREKLYNV
ISLEFSHTRLENLVQRPTTVDLIDWVDNMWPRHLKESQTESTNAILDMQYPKVQKYCLMS
VRGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVS
DCQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNK
FRYPFYYEMCWYVLERYVYCITSHSHLTKDFQKESLSMDMELCSSESGNMDEDDGEAGKD
SRRPVTRRSILTSPVANGANLDYEELGRSCRNLPGLKRTMSMDSESSRGSHNGQAWDSHS
NSPQKGKKIHLTQFELEGLHCLVDKLESLPLHKKCVPTGIEDEDALIADIKLLLEEYASS
DPKLALTGIPIVQWPKRDKLKLQVRPKLRLPTIPITKPHTMKPAPRPATVRPTVSPIVSG
ARRRRVRCRKCKACLQGECGMCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHSVTCALC
GEVDKNEDSQDFEKKLMECCICNEIVHPGCLRMDGEGILNDELPNCWECPKCYKGDELEK
AQKRKMDDGDDDTVQAKVLRPLRSCEEPLTPPPHSPTPMLQLIHDPASPRGVVTRSSPGA
GPSDHHVVREKENNPSGKKELSEVEKAKLHGSYLTVTLQRPTKDMHGTSIVPKLQAITAS
STNLRHSPRVVMRQSSARTPQRGGDEEAAEEDDEEESADEEDESAEESGVARLNGQGSRA
FDGEEIWMQKEVWMSVFRYLTRKELCECMRVCKTWYKWCGDRRLWTKIDLSRYKSITPLA
LGGIIRRQPVSLDLSWTNISRKQLTWLIARLPGLKDLILAGCSWSAVSALSTSTCPLLRT
LDLRWAVGIKDPQIRDLLTPPSDKPSQDNRSKLRNMIDFRLAGLDITDATLRLIIRHMPL
LSRLDLSHCNHLTDQSTNLLTAVGSSTRNSLTEINMAGCNKLTDQTLLYLRRISNVTLID
LRGCKQITRKACEHFISDLSINSLYCLSDEKLIQKIS
NT seq 3534 nt   +upstreamnt  +downstreamnt
atggcggcagctgcttctataaaaggacagaagaaagccagagacctggaggaggaagaa
gacgacagcagttccgatatctccttctcactctcgtcggaagagtctgagatggagcct
gaagaagagcggatccgttatagcaaaagactgcgtggtgctatgagacgtcgttatgag
gatgatggcatctcagatgatgagattgagggcaaacgaacatttgatcttgaagagaaa
cttaccacaaacaaatttaatgccaactttgttgtctttatggaaggcaaagatttcact
gtggaatatattcagcgtggtggtttaagagaccctttgatcttcaagaattctgatgga
cttggaattaaaatgccagagccagacttcagtgtgagtgatgtacgactatatgtaggg
agtcggaggatggtggatgtcatggatgtgaatacacagagagacattgagatgacaatg
gctcagtgggcacgctattatgaaactccagaggaggagcgggagaagctgtataatgtt
atcagcctggagttcagtcatacccggcttgagaacctggtacagagaccaacaacggtg
gatttgattgattgggttgacaacatgtggccaaggcatcttaaagaaagccagacagaa
tcaacgaatgccattctggatatgcagtatcccaaagtgcagaaatactgtctgatgagt
gtcaggggctgctatactgacttccatgtggactttggtggcacttctgtatggtatcat
attcacagagggggaaagatcttctggttaatccctcccactcctcagaacttggagtta
tatgaaaactggctgctctcagggaaacaaggggacatttttcttggtgaccgggtgtca
gattgtcagcgtattgagctcaagcaaggctatacctttgtcataccctcaggttggatc
catgcagtgtacactcctatggacacccttgtttttggtggtaactttctgcatagtttc
aatatccctatgcagttgaggatctacagcattgaagaccgaacacgggtcccaaataag
tttcgctatcccttttattatgaaatgtgctggtatgtactagaacgctatgtctactgc
atcaccagccattctcacctgactaaggactttcagaaggaatcgctcagcatggatatg
gagctatgtagctcagagtctggaaacatggatgaagatgatggagaagcaggaaaggac
tcaaggcgtccagtcaccagacggtcaatactcactagccctgtggctaatggtgctaac
ctagactatgaggagctaggtagaagctgccggaatttgccaggtctaaagagaactatg
tccatggactctgagtccagccgaggctctcacaatggccaggcctgggactctcacagc
aacagccctcaaaagggcaagaagatacatctgacacaatttgaacttgagggtctgcac
tgtcttgtagacaagctggaatctttgcctctgcacaagaagtgtgtacctactggcatt
gaggatgaggatgccctgattgctgacatcaagctgttgctggaggaatacgcaagcagt
gaccccaagctggcacttactggcatccctattgtccagtggccaaagagggataagctc
aaacttcaggttcggccaaagttaagattacctaccatccccatcaccaagccccacacc
atgaaaccagcgccacggcctgcgactgtgaggcccacagtctctcctatagtgtctggt
gctcgcagaaggcgggtgcgatgtcgtaaatgcaaggcctgcctgcagggtgaatgtggc
atgtgccactactgcagggatatgaagaagtttggtgggcctggtcgtatgaagcagtcc
tgtgtattgcgacagtgcttggcgccccgactgcctcactctgtcacatgtgcactttgt
ggggaggtagataagaatgaggattcacaggactttgagaagaagttaatggaatgctgc
atctgcaatgaaattgttcaccctggctgtctacggatggatggggaagggatattgaat
gatgaattgcccaactgctgggagtgtccaaagtgctacaagggagatgagttggagaaa
gcccagaagcgaaaaatggatgatggtgatgatgacacagtccaagccaaagtcctacgc
cccctgcgaagctgtgaggagcctctgactccaccaccacactcacccaccccaatgctg
cagttgatccatgaccctgcatcaccgcgtggcgtggtgacacgatcctctccaggagca
gggcctagtgatcatcatgtggtgcgggaaaaggaaaataaccctagtggcaagaaagag
ctttcagaggtagaaaaggccaagctccatggctcatatcttacagtcacgttacaaaga
cctaccaaagacatgcatggcacttccattgtgcccaaactgcaggcgatcactgcctcc
tccaccaatctgcggcactcaccccgtgttgtcatgcgccaaagttcagccagaacaccc
cagcggggtggagatgaagaggcagctgaggaagatgatgaggaagaaagtgcagatgaa
gaagatgagagtgctgaggagagtggggtagctagactgaatggtcaaggtagcagggca
tttgacggcgaggagatctggatgcagaaggaagtgtggatgtctgtcttccgctatctc
actcggaaagagctctgtgaatgtatgcgtgtatgcaaaacctggtacaaatggtgtggt
gacagaagattgtggacaaagattgatttgagcaggtacaagtccatcacacccttggct
ctagggggtatcatcaggaggcagccagtcagccttgacctcagctggaccaatatttcc
agaaaacagctcacctggctcattgccaggctaccaggcctcaaagacctcatcttagca
ggctgctcctggtcagcagtctctgctcttagtacctccacctgcccccttctcaggact
ctcgatcttcggtgggcagtaggaatcaaggatccacagattcgggacttgctcacacct
ccatcagataaaccaagtcaagacaatcgcagcaaactccgtaatatgatagacttccgg
ttggctgggctggacattactgatgccacactccggcttatcatccgtcacatgcctctc
ctatcacgacttgatcttagtcactgcaatcaccttacagaccagtcaacaaacctgtta
acagctgtggggtcttccacacgaaactcactcactgaaatcaacatggcaggctgcaat
aagctcacggaccagaccctgctgtatctgcggcgcatctcaaatgtcaccctgatagac
ctgcgaggctgcaagcagatcacccgcaaggcctgcgagcacttcatctcagacctgtca
atcaacagcctctactgcctgtctgatgaaaagctgatccagaaaatcagctag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (53)   

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