KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107115206
Entry
107115206         CDS       T04299                                 
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
  KO
K14284  nuclear RNA export factor
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03008  Ribosome biogenesis in eukaryotes
gja03013  Nucleocytoplasmic transport
gja03015  mRNA surveillance pathway
gja05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gja00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107115206 (NXF1)
   03015 mRNA surveillance pathway
    107115206 (NXF1)
   03008 Ribosome biogenesis in eukaryotes
    107115206 (NXF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    107115206 (NXF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gja03019]
    107115206 (NXF1)
   03009 Ribosome biogenesis [BR:gja03009]
    107115206 (NXF1)
Messenger RNA biogenesis [BR:gja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107115206 (NXF1)
   mRNA cycle factors
    Stress granule specific factors
     107115206 (NXF1)
Ribosome biogenesis [BR:gja03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    107115206 (NXF1)
SSDB
Motif
Pfam: Tap-RNA_bind TAP_C NTF2 LRR_4 LRR_8 LRR_9
Other DBs
NCBI-GeneID: 107115206
NCBI-ProteinID: XP_015272332
Position
Un
AA seq 629 aa
MAEGGKGGYSEHDDRVGGGGSSNRGFPGRRRKGRGPFRGKMYSEMNHHQKNWSNPGSGPR
SRVEEEDEDVTMSDPHDALRSRYTPYGQRPNRPDRERGGLSNLNLTVRKNLGAPERNFAI
SNATKKNWFKVTVPYGRKYEKSWLLNAIQNQCTVPFIPLEVHFANNRVVFYVEDAAAANA
LKHLSRKIVDPDGYKVVIMINAWSAPPTVQRELKPEEIEQLKLCMSRRYDGSQQALDLKS
LRTDPDLVAQNMDVVLHRRNCMQTMLHIIEENIPELLSLNLSDNKLYRLDDMAEIAEKAP
NLKILNLSCNQLKTDRDLDKLKTLKLEELWLDNNPLCDNFRDQSTYISAVRERFPKLLRL
DGHELPPPIAFDVEAPTTLPDCKGSYFPSDDLKVLILRFLQQYYAIYDSGDRQGLLDAYH
DGACCSLSIPVSIQNNPGRSPLGEYFKNSRNVKRLKDPAMRFRLLKHTRLNVVAFLNELP
KTQHDINSFVVDVCVQTSTLLCFTLSGVFKEVDGKNRESMRAFTRVFIAVPASNNGLCIV
NDQLFIRKATNEEIRKAFVMPAPTPSSSPVPTLSAEQQEMLQNFSLQSGMNLEWSQKCLS
DNDWDYAHAARVFTQLKAEGKIPEVAFLN
NT seq 1890 nt   +upstreamnt  +downstreamnt
atggcggaaggagggaagggcggatacagcgaacatgatgatcgtgtgggtggaggaggc
agcagcaacaggggcttccctgggcggcggaggaaaggccggggccccttccgagggaag
atgtacagtgagatgaatcaccatcagaaaaactggagcaatccaggctctggtcctcgt
agccgtgtagaggaagaggatgaagatgttaccatgagtgaccctcacgatgcactacga
tctcgctacactccttatgggcagcggccaaacagaccagaccgggagcggggcggcctg
agcaatttaaacctcacagtgcgaaagaatctgggagctccagagcgaaattttgccatc
agcaatgccaccaagaagaactggttcaaagtcacagttccctatgggaggaaatatgaa
aagtcatggcttcttaatgccattcagaatcaatgcactgttcccttcattcctttggag
gttcactttgccaacaatcgagttgtgttttacgttgaggacgctgctgctgccaatgcc
ctcaagcacttgtcccgaaaaattgttgacccagatggctacaaggtggtcataatgata
aacgcatggagtgcaccaccaactgtccagcgtgaactgaagccagaagagattgagcag
ttgaagctttgtatgagtaggaggtacgatggttcgcaacaggccctggacctgaagagc
cttcggacagatccagatctggtggctcaaaacatggatgtggtgttgcatcgccgaaac
tgtatgcaaactatgctgcacatcattgaggagaacatccctgagcttctctctctcaac
ctgagcgacaacaagctctaccggctggatgatatggccgaaattgccgagaaggctccc
aatctgaaaatcctcaatttgtcctgcaaccagttgaagacggaccgtgatctggacaag
ttgaaaacgttaaagcttgaggaactgtggctggacaacaatccgctgtgtgataacttc
cgggaccagtccacctatatcagcgctgtccgggaacggtttccgaagctgctgaggctg
gatggtcacgaactgccccctcccattgcctttgatgtagaagcacctactacgctgccc
gactgcaagggcagctattttccttcggacgacctgaaggtgctgattctccgatttctg
cagcaatactacgctatctatgactctggggaccggcaagggttattggatgcctaccat
gatggggcctgctgctccctgagcattcccgtttcgatacagaataatccaggaaggagc
cctttgggtgaatacttcaagaacagtaggaacgtgaaaagacttaaagatcccgccatg
cgtttcaggcttctgaagcacacgcggctgaatgttgtggccttcctcaacgagctgccc
aagactcaacatgacatcaactccttcgtggtggacgtctgtgtgcaaacgagcacacta
ctgtgtttcacgctcagcggggtctttaaggaagtggatggcaagaatcgggagtcgatg
cgggcattcacacgcgtgttcattgctgtgcctgccagcaacaacgggctgtgcattgtt
aatgaccagctgtttatccgcaaggccaccaatgaggaaatccgcaaggctttcgtcatg
ccagcacccaccccctcttctagtcccgtgcccacactctccgcagagcagcaggaaatg
ttgcagaatttctcgctgcagtctggcatgaacctggagtggtctcagaagtgcctctca
gacaatgattgggactatgctcatgccgcccgcgtgttcacccagctcaaggctgagggg
aagatcccagaagtggctttcctcaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (37)   

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