KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107122903
Entry
107122903         CDS       T04299                                 
Symbol
SMARCA2
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:gja00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107122903 (SMARCA2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gja03021]
    107122903 (SMARCA2)
   03036 Chromosome and associated proteins [BR:gja03036]
    107122903 (SMARCA2)
Transcription machinery [BR:gja03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     107122903 (SMARCA2)
Chromosome and associated proteins [BR:gja03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     107122903 (SMARCA2)
  Chromatin remodeling factors
   BAF complex
    107122903 (SMARCA2)
   PBAF complex
    107122903 (SMARCA2)
   GBAF(ncBAF) complex
    107122903 (SMARCA2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C SnAC Bromodomain HSA BRK QLQ ResIII HDA2-3 DEAD
Other DBs
NCBI-GeneID: 107122903
NCBI-ProteinID: XP_015281531
Position
Un
AA seq 1566 aa
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPSSVHSMMGPSPGPPSVPHAMPTM
GPNDYPQEGMHPMHKPIDGLHEKGMVEDLHSNSMKTASMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGPPEHVSSPMSGGGPTPPQMPPSQPGPMIPGDPQVMSQPSRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQTLYKTPAMGILPLGGPAAGPG
AASVMPGHTAAIAPKTWPEGQGADLSASSTPQKLAVPPPSGRPSPAPAATQPSAVMPGPS
VPQPAAVQPSPIVPLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPG
SLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREA
RMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHAN
TEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWE
HKQAQAAKEKKKRRRRKKKAEDNTEGMGSGLGPDGEPIDESSQMSDLPVKVTHTETGKVL
LGSEAPKASQLDAWLEMNPGYEVAPRSDSEEESDSEYEEEDDEEDSSRQETDEKIHLDPN
SEDVSERDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAIAERVDKQSSLLINGTLK
HYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTL
SNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRW
KYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKS
CSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYV
IKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHI
EESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDY
FAFRNFAYLRLDGTTKSEDRAALLKKFNEPNSQYFIFLLSTRAGGLGLNLQAADTVIIFD
SDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFD
QKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDA
RNPKRKPRLMEEDDLPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQW
LRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLTK
QMNAIIDTVINYKDSSGRQLSEVFIQLPSRKEYPEYYELIRKPVDFKKIKERIRNHKYRS
LGDLEKDINLLCLNAQTFNLEGSQIYEDSIVLQSVFKSARQKLAKEDESEEESNEEEEDE
EDESESESKSVKVKIKLNKKDEKNRDKGKGKKRQSRVKAKPVVSDDDTDEDQEENDQSEA
SASDDE
NT seq 4701 nt   +upstreamnt  +downstreamnt
atgtctacaccaacagatcctggtgcaatgcctcatcctggcccttctccaggcccaggt
ccttcaccaggaccaatattaggtcctagcccaggcccaggtccttcaccaagttcagta
cacagcatgatgggaccaagtcctggacccccaagtgttccacatgcaatgccaaccatg
ggacctaatgattacccacaagaaggcatgcacccaatgcacaaacccatcgatggtttg
catgagaaaggaatggttgaagacctgcacagcaactccatgaagacagcaagtatgcga
cctcctcatcctggaatggggccacctcaaagtccaatggatcagcatagtcaaggctat
atgtctcctcatccatctcctctgggaccaccagagcatgtgtctagtccaatgtctgga
ggaggaccaactccaccgcagatgccaccaagccagccaggtcccatgatcccaggagat
ccacaagttatgagccaacccagccgcggtccttcacctttcagtcctgttcaactgcat
caactccgagcacagattctagcatacaaaatgctggctagaggtcagccattgcctgaa
aatcttcaacttgctgtacaaggaaagaggacattacctgggattcaacaacaacagact
ctttacaagacacctgcaatggggattctaccactgggtggccctgcagctgggccagga
gctgcttcagtaatgccaggacatacagctgctatagccccaaaaacctggccagaagga
caaggagcagatctgagtgcttctagtacacctcagaagcttgctgttccaccccctagt
ggacgaccttcacctgcccctgcagctactcagccttctgcagtaatgcccggtccttct
gtaccacagcccgcagctgtacagccatctcctattgttccgctgcagcaaaagcagaac
cgtatcagcccaattcaaaagcctcaaggcctggatcctgttgaaatacttcaggagcga
gaatacaggcttcaggctcgaattgctcacagaattcaggaattagaaaatttgcctggc
tccttgcctccagatctgagaactaaagccacagtggagctgaaggcacttaggctactg
aatttccagcgccagttaagacaagaggttgtggcatgcatgcgtcgtgacacaactttg
gagactgctctgaactcaaaggcctacaaacgcagcaagcgccaaactctgagggaagcc
cgaatgacggaaaaacttgagaaacaacagaagatagaacaggagagaaaacgtagacaa
aagcaccaggaatatctcaacagcatcttgcaacatgctaaagattttaaagagtaccat
cggtctgttgctggcaaaattcagaaactttctaaagccgttgctacttggcatgctaac
actgagcgtgaacagaagaaagaaacagagaggattgaaaaagaaagaatgagaaggctg
atggctgaagatgaagaaggctaccgtaaactgatcgatcagaagaaagacaggcgtttg
gcatacctcctacagcaaactgatgaatatgtggctaacctgactaatctggtgtgggaa
cacaagcaagcacaagctgccaaagaaaagaaaaagaggaggagaagaaagaagaaggca
gaagataatacagaaggaatgggatctggacttggtcctgatggagagcccatagatgag
agcagtcagatgagtgatctcccagtcaaagtaactcacactgaaacgggcaaagtcctc
cttggatcagaggctcctaaagcaagtcagttggatgcttggttagaaatgaaccctggc
tatgaagtcgctcctcgttcagacagtgaagaagaaagtgactctgagtatgaggaggaa
gacgatgaagaggactcaagtagacaagagacagatgagaagatccacttggatccaaac
agcgaagatgtttctgagcgagatgctaaacaaataattgagacagccaaacaagatgtg
gatgatgaatacagcatgcagtatagtgccagagggtctcagtcttactatacagtggct
catgcaatcgccgagagagtagacaagcagtcttctcttcttattaatggcacactaaaa
cattatcagatccaggggcttgaatggatggtttctctgtataataacaatttgaatgga
attttagctgatgaaatggggctcggaaagaccatacagacgattgcactcatcacttat
ctgatggaacacaaaaggctcaatggcccctatctcatcattgttcccctctcgacttta
tccaactggacttatgaatttgacaaatgggccccttctgtggtgaaaatttcttacaag
ggcacacctgctatgcgccgatctcttgttcctcagcttcgtagtggaaaatttaatgtt
cttttgaccacttacgagtatataataaaggacaagcacattcttgctaagattcggtgg
aagtatatgattgtagatgaaggtcatcgaatgaagaaccatcattgcaagctgactcag
gtgttgaatactcattatgtagccccaagacggattcttttgactggaactccattgcag
aataaactgcctgaactttgggctcttcttaacttcctccttccaacaattttcaagagc
tgcagcacctttgaacagtggttcaatgccccctttgccatgactggagaaagggtggat
ttaaatgaggaggaaactattttgatcattcggcgcctccacaaagttctgcgacccttc
ctgctaaggaggctgaagaaagaagttgaatctcagctgccagaaaaggttgaatatgtt
attaagtgtgatatgtcagcccttcagaaaattctgtatcgccacatgcaagccaaagga
atcctccttaccgatggctctgagaaagacaagaaggggaaaggaggagccaaaactctc
atgaacaccatcatgcaattgagaaagatatgcaatcacccgtatatgttccagcatatt
gaggaatcttttgctgaacatttgggctattcaaacggtgtcatcaatggagctgagctt
tatcgagcttcagggaagtttgagctacttgatcgaattctaccaaagctgcgagccaca
aaccatcgtgtgcttcttttctgtcaaatgacgtcactcatgaccattatggaagactat
tttgcttttagaaactttgcttacctgcggcttgatgggacaacaaaatctgaggatcga
gcagctctgctgaagaagttcaatgagcccaattcccaatatttcatctttctgctgagc
acaagggctggaggtctgggcttgaaccttcaggcagctgatactgtcattatttttgac
agtgactggaatcctcaccaggatttgcaggcacaagaccgagctcatcgaattggacaa
cagaatgaagttcgagtcctacgactatgcacagtgaacagtgtggaagagaaaattctt
gctgctgccaaatataaattgaatgtggatcagaaagttattcaagctggcatgtttgac
caaaaatcttcaagccatgaacggagggcttttctccaggccatattggagcatgaagaa
gaaaatgaggaagaagatgaagtcccagatgatgaaactctgaatcagatgattgctcga
cgggaagaggaatttgatcttttcatgcgaatggatatggaccggcgtagagaggatgct
cgaaatccaaaacgcaaaccacgcttgatggaggaagatgacctgccatcctggattatc
aaagatgatgctgaagttgaaaggcttacctgtgaggaagaggaagagaagatatttggg
agaggatcccgacagcgcagggatgtggattacagtgatgccctgacagaaaaacagtgg
ttaagggcaattgaagacggcaatttggaagaaatggaagaggaagtgcggcttaaaaag
cgaaaaaggagaagaaatgtggacaaagattcaggcaaagaagatggagagaaggcaaaa
aagaggcgaggaagacctccagcagagaaattgtctcccaatcctcctaagctgacaaaa
cagatgaatgccattattgatactgtgatcaattataaagacagttcaggacgacagtta
agtgaagttttcatccagctaccttccaggaaagaatacccagagtactatgagttaatt
aggaagccggtggacttcaaaaaaataaaggaaagaatccgtaaccataaataccgcagt
ctaggtgacctggagaaggacatcaatttgttgtgtctcaatgctcagactttcaacttg
gaaggatcacagatctatgaggattccattgttctccagtcagtgttcaaaagtgcacgg
cagaagcttgccaaagaagatgaaagtgaggaagaaagtaatgaggaggaggaagatgag
gaagatgagtcagagtcagaatccaaatctgtaaaagtgaaaataaagctcaacaaaaaa
gatgagaaaaaccgagacaaaggaaaaggcaagaagcgccaaagccgggtaaaagccaaa
ccagtggtgagcgatgatgacactgatgaggatcaagaagaaaatgaccagtcagaagca
agcgccagtgatgacgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (10)   
   Pfam (10)   
All databases (67)   

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